Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03734 and BSU25020

See Amino acid alignment / Visit BSNT_03734 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:44
# Commandline: needle
#    -asequence dna-align/BSNT_03734___sodA.1.22522.seq
#    -bsequence dna-align/BSU25020___sodA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03734___sodA-BSU25020___sodA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03734___sodA-BSU25020___sodA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03734___sodA
# 2: BSU25020___sodA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 609
# Identity:     605/609 (99.3%)
# Similarity:   605/609 (99.3%)
# Gaps:           0/609 ( 0.0%)
# Score: 3009.0
# 
#
#=======================================

BSNT_03734___      1 ATGGCTTACGAACTTCCAGAATTACCTTATGCGTACGATGCTTTAGAACC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25020___so      1 ATGGCTTACGAACTTCCAGAATTACCTTATGCGTACGATGCTTTAGAACC     50

BSNT_03734___     51 GCATATCGACAAGGAAACTATGACTATTCACCATACGAAACACCACAACA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25020___so     51 GCATATCGACAAGGAAACTATGACTATTCACCATACGAAACACCACAACA    100

BSNT_03734___    101 CATACGTGACAAATTTAAACAAAGCGGTTGAAGGAAACACTGCTCTTGCC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25020___so    101 CATACGTGACAAATTTAAACAAAGCGGTTGAAGGAAACACTGCTCTTGCC    150

BSNT_03734___    151 AACAAATCAGTTGAAGAGCTTGTTGCAGATCTTGATTCTGTTCCTGAAAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25020___so    151 AACAAATCAGTTGAAGAGCTTGTTGCAGATCTTGATTCTGTTCCTGAAAA    200

BSNT_03734___    201 CATCCGCACTGCGGTCCGCAACAACGGCGGCGGACACGCGAACCACAAAT    250
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU25020___so    201 CATCCGCACTGCAGTCCGCAACAACGGCGGCGGACACGCGAACCACAAAT    250

BSNT_03734___    251 TATTCTGGACACTTTTATCTCCAAACGGCGGAGGCGAACCGACTGGCGCG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25020___so    251 TATTCTGGACACTTTTATCTCCAAACGGCGGAGGCGAACCGACTGGCGCG    300

BSNT_03734___    301 CTTGCTGAAGAGATCAGCAGTGTATTTGGAAGCTTTGACAAATTCAAAGA    350
                     ||||||||||||||.|.|||||||||||||||||||||||||||||||||
BSU25020___so    301 CTTGCTGAAGAGATTAACAGTGTATTTGGAAGCTTTGACAAATTCAAAGA    350

BSNT_03734___    351 GCAATTCGCAGCAGCAGCAGCTGGACGCTTCGGTTCTGGCTGGGCATGGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25020___so    351 GCAATTCGCAGCAGCAGCAGCTGGACGCTTCGGTTCTGGCTGGGCATGGC    400

BSNT_03734___    401 TTGTTGTGAACAACGGGAAACTTGAAATCACAAGCACGCCAAACCAAGAT    450
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU25020___so    401 TTGTTGTGAACAACGGTAAACTTGAAATCACAAGCACGCCAAACCAAGAT    450

BSNT_03734___    451 TCTCCGCTTTCAGAAGGCAAAACGCCTATCTTAGGTCTTGACGTTTGGGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25020___so    451 TCTCCGCTTTCAGAAGGCAAAACGCCTATCTTAGGTCTTGACGTTTGGGA    500

BSNT_03734___    501 GCATGCTTACTACCTTAACTATCAAAACCGCCGTCCTGATTACATTTCAG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25020___so    501 GCATGCTTACTACCTTAACTATCAAAACCGCCGTCCTGATTACATTTCAG    550

BSNT_03734___    551 CTTTCTGGAATGTTGTAAACTGGGACGAAGTGGCTCGTCTATACAGCGAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25020___so    551 CTTTCTGGAATGTTGTAAACTGGGACGAAGTGGCTCGTCTATACAGCGAA    600

BSNT_03734___    601 GCAAAATAA    609
                     |||||||||
BSU25020___so    601 GCAAAATAA    609


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