Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03682 and BSU24700

See Amino acid alignment / Visit BSNT_03682 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:38
# Commandline: needle
#    -asequence dna-align/BSNT_03682___comGD.1.22522.seq
#    -bsequence dna-align/BSU24700___comGD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03682___comGD-BSU24700___comGD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03682___comGD-BSU24700___comGD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03682___comGD
# 2: BSU24700___comGD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 432
# Identity:     427/432 (98.8%)
# Similarity:   427/432 (98.8%)
# Gaps:           0/432 ( 0.0%)
# Score: 2115.0
# 
#
#=======================================

BSNT_03682___      1 TTGAACATTAAATTAAACGAGGAGAAGGGGTTTACCCTTTTAGAAAGTTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24700___co      1 TTGAACATTAAATTAAACGAGGAGAAGGGGTTTACCCTTTTAGAAAGTTT     50

BSNT_03682___     51 GCTTGTGTTAAGCCTTGCCTCTATCCTCCTGATTGCCGTCTTCACCACAC    100
                     |||||||||||||||||||||||||||||||.|.|||||||||||.||||
BSU24700___co     51 GCTTGTGTTAAGCCTTGCCTCTATCCTCCTGGTGGCCGTCTTCACTACAC    100

BSNT_03682___    101 TTCCTCCTGCTTATGACAATACAGCTGTCCGACAGGCAGCAAGGCAGCTG    150
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU24700___co    101 TTCCTCCTGCTTATGACAATACAGCTGTCCGACAGGCAGCAAGTCAGCTG    150

BSNT_03682___    151 AAAAATGATATTATGCTCACACAGCAGACTGCTATTTCCCGTCAACAAAG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24700___co    151 AAAAATGATATTATGCTCACACAGCAGACTGCTATTTCCCGTCAACAAAG    200

BSNT_03682___    201 AACAAAAATTCTCTTTCATAAAAAAGAATATCAATTAGTCATTGGTGATA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24700___co    201 AACAAAAATTCTCTTTCATAAAAAAGAATATCAATTAGTCATTGGTGATA    250

BSNT_03682___    251 CGGTCATTGAACGTCCGTATGCAACGGGACTTTCTATAGAACTGCTGACA    300
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU24700___co    251 CGGTTATTGAACGTCCGTATGCAACGGGACTTTCTATAGAACTGCTGACA    300

BSNT_03682___    301 TTAAAAGACCGTTTGGAATTTAATGAGAAAGGGCACCCGAATGCAGGCGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24700___co    301 TTAAAAGACCGTTTGGAATTTAATGAGAAAGGGCACCCGAATGCAGGCGG    350

BSNT_03682___    351 AAAAATACGAGTAAAAGGCCATGCCGTTTATGACATAACAGTTTATCTAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24700___co    351 AAAAATACGAGTAAAAGGCCATGCCGTTTATGACATAACAGTTTATCTAG    400

BSNT_03682___    401 GGAGCGGGAGAGTCAATGTGGAGAGAAAATAA    432
                     ||||||||||||||||||||||||||||||||
BSU24700___co    401 GGAGCGGGAGAGTCAATGTGGAGAGAAAATAA    432


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