Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03668 and BSU24590

See Amino acid alignment / Visit BSNT_03668 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:37
# Commandline: needle
#    -asequence dna-align/BSNT_03668___yqhG.1.22522.seq
#    -bsequence dna-align/BSU24590___yqhG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03668___yqhG-BSU24590___yqhG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03668___yqhG-BSU24590___yqhG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03668___yqhG
# 2: BSU24590___yqhG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 795
# Identity:     788/795 (99.1%)
# Similarity:   788/795 (99.1%)
# Gaps:           0/795 ( 0.0%)
# Score: 3912.0
# 
#
#=======================================

BSNT_03668___      1 GTGAGACAGCAAGAGGTTCACGATTTTCTGCTGCGTTTTTTTCAAGCAAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24590___yq      1 GTGAGACAGCAAGAGGTTCACGATTTTCTGCTGCGTTTTTTTCAAGCAAA     50

BSNT_03668___     51 CAGCTGCCAAATCGTCGATCAAGGCTTAGGCTATATGACAGTGCAGCTTA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24590___yq     51 CAGCTGCCAAATCGTCGATCAAGGCTTAGGCTATATGACAGTGCAGCTTA    100

BSNT_03668___    101 CAGTTGAAATGGACAAACAAATCATGAACCGCCCTTTCTACTGGCATTGG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24590___yq    101 CAGTTGAAATGGACAAACAAATCATGAACCGCCCTTTCTACTGGCATTGG    150

BSNT_03668___    151 CGCGAGAAGACAGGCGGTGATCCGAATCCAATGAAAATCACTTTTATTAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24590___yq    151 CGCGAGAAGACAGGCGGTGATCCGAATCCAATGAAAATCACTTTTATTAC    200

BSNT_03668___    201 AGATAAAGAAAATGCGCCAAAAGACCTAGATGGTGAATTTATATATTTTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24590___yq    201 AGATAAAGAAAATGCGCCAAAAGACCTAGATGGTGAATTTATATATTTTG    250

BSNT_03668___    251 GGGCCCCGCGTCTTTTTCAAATATTTAAAGCTGTTAAACAAAATGGGAGA    300
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU24590___yq    251 GGGCCCCGCGTCTTTTTCAAATATTCAAAGCTGTTAAACAAAATGGGAGA    300

BSNT_03668___    301 TTTACCAGAATGTATGAGAAAATTGAATCAGCCGGAGCCAAAGTCCCACT    350
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU24590___yq    301 TTTACCAGAATGTATGAGAAAATTGAATCAGCCGGAGCTAAAGTCCCACT    350

BSNT_03668___    351 TCAGCCTTGGCTTGGTATAAATGTCACGATTTCATACCAGTCCGACATGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24590___yq    351 TCAGCCTTGGCTTGGTATAAATGTCACGATTTCATACCAGTCCGACATGA    400

BSNT_03668___    401 AAAAGGATAAGTTATTATCACTAGGTCTTCACCTAGTCTCTGGAACGATA    450
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU24590___yq    401 AAAAGGATAAGTTATTGTCACTAGGTCTTCACCTAGTCTCTGGAACGATA    450

BSNT_03668___    451 ATTGAAGATTTTCAAAGCAAGCTGACTCAGCTTTCACTGACATCACAAAT    500
                     ||||||||||||||||||||||||||.|||.||||||||||.||.|||||
BSU24590___yq    451 ATTGAAGATTTTCAAAGCAAGCTGACCCAGTTTTCACTGACGTCTCAAAT    500

BSNT_03668___    501 ATGTGACTATTGCTTCACCATTTCACCTATGATCAAACCAGAAAGCGGAC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24590___yq    501 ATGTGACTATTGCTTCACCATTTCACCTATGATCAAACCAGAAAGCGGAC    550

BSNT_03668___    551 TTAAGCGTATGGAAAACTATATTTCCAAATCCGCTATGCAGGAGCCGTCC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24590___yq    551 TTAAGCGTATGGAAAACTATATTTCCAAATCCGCTATGCAGGAGCCGTCC    600

BSNT_03668___    601 GACTGGGCGGAACAGGCGGTTAACAGGTGGAAGAATGATATGACATTGCT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24590___yq    601 GACTGGGCGGAACAGGCGGTTAACAGGTGGAAGAATGATATGACATTGCT    650

BSNT_03668___    651 TGATAAGTTTTACGAGCATATAGAAGAAAAACCAGAAGAATACCATCTAG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24590___yq    651 TGATAAGTTTTACGAGCATATAGAAGAAAAACCAGAAGAATACCATCTAG    700

BSNT_03668___    701 AAAAACAGGCGCTGAAAACCTTGTATCAACCAAAGATATCAGTTGAAATT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24590___yq    701 AAAAACAGGCGCTGAAAACCTTGTATCAACCAAAGATATCAGTTGAAATT    750

BSNT_03668___    751 GAAAATGGCGGATTGTTTTATCTGCAAAATAATATTTCAAGCTAA    795
                     |||||||||||||||||||||||||||||||||||||||||||||
BSU24590___yq    751 GAAAATGGCGGATTGTTTTATCTGCAAAATAATATTTCAAGCTAA    795


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