Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03660 and BSU24530

See Amino acid alignment / Visit BSNT_03660 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:36
# Commandline: needle
#    -asequence dna-align/BSNT_03660___yqhM.1.22522.seq
#    -bsequence dna-align/BSU24530___yqhM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03660___yqhM-BSU24530___yqhM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03660___yqhM-BSU24530___yqhM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03660___yqhM
# 2: BSU24530___yqhM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 837
# Identity:     831/837 (99.3%)
# Similarity:   831/837 (99.3%)
# Gaps:           0/837 ( 0.0%)
# Score: 4131.0
# 
#
#=======================================

BSNT_03660___      1 ATGCAAAAAGAAACTTGGCGGTTTATAGACTCAGGCAATGCAAGTCCTGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24530___yq      1 ATGCAAAAAGAAACTTGGCGGTTTATAGACTCAGGCAATGCAAGTCCTGC     50

BSNT_03660___     51 ATTCAATATGGCGCTTGATGAAGCGCTTTTATATTGGCACAGCGAAAAGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24530___yq     51 ATTCAATATGGCGCTTGATGAAGCGCTTTTATATTGGCACAGCGAAAAGA    100

BSNT_03660___    101 AAATCCCCCCGGTTATCCGTTTTTACGGCTGGAATCCGGCGACACTTTCT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24530___yq    101 AAATCCCCCCGGTTATCCGTTTTTACGGCTGGAATCCGGCGACACTTTCT    150

BSNT_03660___    151 GTAGGGTATTTTCAAAATATTAAAAAGGAAATCAATTTTGAAGCAGTACA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24530___yq    151 GTAGGGTATTTTCAAAATATTAAAAAGGAAATCAATTTTGAAGCAGTACA    200

BSNT_03660___    201 TAAATATAATCTCGGATTCGTCAGACGCCCGACCGGCGGGAGAGGTGTGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24530___yq    201 TAAATATAATCTCGGATTCGTCAGACGCCCGACCGGCGGGAGAGGTGTGC    250

BSNT_03660___    251 TTCACGATCAGGAACTGACATACAGCGTAATTGTTTCGGAAGAGCACCCC    300
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU24530___yq    251 TGCACGATCAGGAACTGACATACAGCGTAATTGTTTCGGAAGAGCACCCC    300

BSNT_03660___    301 GAGATGCCGGCGACTGTTACTGAGGCTTACCGGGTTATTTCAGAAGGCAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24530___yq    301 GAGATGCCGGCGACTGTTACTGAGGCTTACCGGGTTATTTCAGAAGGCAT    350

BSNT_03660___    351 ACTTCAAGGCTTTAGAAATCTCGGTCTGGACGCTTACTTTGCCATCCCGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24530___yq    351 ACTTCAAGGCTTTAGAAATCTCGGTCTGGACGCTTACTTTGCCATCCCGA    400

BSNT_03660___    401 GAACTGAAAAAGAAAAAGAAAGCTTAAAAAATCCGCGGTCATCTGTTTGT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24530___yq    401 GAACTGAAAAAGAAAAAGAAAGCTTAAAAAATCCGCGGTCATCTGTTTGT    450

BSNT_03660___    451 TTTGACGCGCCTTCGTGGTATGAGCTAGTGGTTGAGGGGCGCAAGGTGGC    500
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU24530___yq    451 TTTGACGCGCCTTCGTGGTATGAACTAGTGGTTGAGGGGCGCAAGGTGGC    500

BSNT_03660___    501 GGGAAGCGCGCAAACGAGACAAAAAGGCGTGATTCTTCAGCATGGCTCCA    550
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU24530___yq    501 GGGAAGCGCGCAAACGAGACAAAAAGGTGTGATTCTTCAGCATGGCTCCA    550

BSNT_03660___    551 TTCTTCTTGATTTAGATGAGGACAAGCTGTTCGATCTGTTCTTATATCCA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24530___yq    551 TTCTTCTTGATTTAGATGAGGACAAGCTGTTCGATCTGTTCTTATATCCA    600

BSNT_03660___    601 AGTGAAAGAGTAAGAGAGCGGATGCAGCGCAATTTCAAAAACAAAGCGGT    650
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU24530___yq    601 AGTGAAAGAGTAAGAGAGCGGATGCAGCGCAATTTCAAAAATAAAGCGGT    650

BSNT_03660___    651 TGCCATTAATGAACTCACCGAAAAGCGGGTGACGATGGATGAGGCTCGTA    700
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU24530___yq    651 TGCCATTAATGAACTCATCGAAAAGCGGGTGACGATGGATGAGGCTCGTA    700

BSNT_03660___    701 AAGCCTTTAAAGAAGGATTTGAAACAGGTCTTAACATTCATTTGGAGCCA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24530___yq    701 AAGCCTTTAAAGAAGGATTTGAAACAGGTCTTAACATTCATTTGGAGCCA    750

BSNT_03660___    751 TATGAACTTTCTCAGGAAGAGCTTGGTTTTGTTCATCACTTGGCTGAAAC    800
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU24530___yq    751 TATGAACTTTCTCAGGAAGAGCTTGATTTTGTTCATCACTTGGCTGAAAC    800

BSNT_03660___    801 AAAGTACGCTTCAGATGAATGGAATTATAAGCGGTAA    837
                     |||||||||||||||||||||||||||||||||||||
BSU24530___yq    801 AAAGTACGCTTCAGATGAATGGAATTATAAGCGGTAA    837


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