Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03656 and BSU24510

See Amino acid alignment / Visit BSNT_03656 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:35
# Commandline: needle
#    -asequence dna-align/BSNT_03656___yqhO.1.22522.seq
#    -bsequence dna-align/BSU24510___yqhO.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03656___yqhO-BSU24510___yqhO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03656___yqhO-BSU24510___yqhO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03656___yqhO
# 2: BSU24510___yqhO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 876
# Identity:     863/876 (98.5%)
# Similarity:   863/876 (98.5%)
# Gaps:           0/876 ( 0.0%)
# Score: 4263.0
# 
#
#=======================================

BSNT_03656___      1 ATGTATATTGACGGTGTTTTTTCCGGCGGAGGAGTAAAAGGCATTGCGCT     50
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU24510___yq      1 ATGTATATTGACGGTGTGTTTTCCGGCGGAGGAGTAAAAGGCATTGCGCT     50

BSNT_03656___     51 CGCAGGCGCTTATGAAGTGCTTGAGGAAAAAGGCTTCCGCTTTAAAAGAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24510___yq     51 CGCAGGCGCTTATGAAGTGCTTGAGGAAAAAGGCTTCCGCTTTAAAAGAG    100

BSNT_03656___    101 TTGCGGGTACAAGCGCCGGCGCCATTATTGCCGCTTTCATTGCGTCAGGT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24510___yq    101 TTGCGGGTACAAGCGCCGGCGCCATTATTGCCGCTTTCATTGCGTCAGGT    150

BSNT_03656___    151 TACACCAGTAAGGAAATCCACGCTTTAATTGAAGAAGTGGACGGAGAGAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24510___yq    151 TACACCAGTAAGGAAATCCACGCTTTAATTGAAGAAGTGGACGGAGAGAA    200

BSNT_03656___    201 ATTGCTGGATCAGAGGTACTCATTTCTCCCCTTAAAGATGCTCCAGTGGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24510___yq    201 ATTGCTGGATCAGAGGTACTCATTTCTCCCCTTAAAGATGCTCCAGTGGG    250

BSNT_03656___    251 TGTCCATCTACTGGCGTCTTGGCTTATACAAAGGCGATACGATAGAAAAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24510___yq    251 TGTCCATCTACTGGCGTCTTGGCTTATACAAAGGCGATACGATAGAAAAA    300

BSNT_03656___    301 TGGATTGCTGATCTGTTAAGAGCGAAAGGCATAAGGGTTTTCGGCGATTT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24510___yq    301 TGGATTGCTGATCTGTTAAGAGCGAAAGGCATAAGGGTTTTCGGCGATTT    350

BSNT_03656___    351 ACAGAAAGGGTCTCTGCGCCTTATTGCTTCTGATCTGACAAACGGCACCA    400
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU24510___yq    351 GCAGAAAGGGTCTCTGCGCCTTATTGCTTCTGATCTGACAAACGGCACCA    400

BSNT_03656___    401 TGATTGTTTTGCCGGACGATTTGGCCCGTTACGGGTTAAATCCCGATATG    450
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU24510___yq    401 TGATTGTTTTGCCGGACGATTTGGCCCGTTACGGGTTAAATCCAGATATG    450

BSNT_03656___    451 TTCCCGGTTGCCAGAGCGGTCAGAATGAGCTGCAGCATTCCGTATTTTTT    500
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU24510___yq    451 TTCCCGGTTGCCAGAGCGGTCAGAATGAGCTGCAGCATTCCGTATTTCTT    500

BSNT_03656___    501 TGAACCGATAAAATTAAAAACGGACACAGGCACCGCCACGGTTGTCGACG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24510___yq    501 TGAACCGATAAAATTAAAAACGGACACAGGCACCGCCACGGTTGTCGACG    550

BSNT_03656___    551 GAGGTGTGTTAAGCAATTTCCCCATCTGGCTGTTTTCAAAGGAAAGAAAG    600
                     ||||.||||||||||||||.||.|||||||||||||||||||||||||||
BSU24510___yq    551 GAGGCGTGTTAAGCAATTTTCCAATCTGGCTGTTTTCAAAGGAAAGAAAG    600

BSNT_03656___    601 CGCCCTGTGATCGGTGTGACGCTTGCGCCGCGTGAAAGAGAGCGTCCGAA    650
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU24510___yq    601 CGCCCTGTGATCGGTGTCACGCTTGCGCCGCGTGAAAGAGAGCGTCCGAA    650

BSNT_03656___    651 AAAAAATATCCGCAACGCTTTTGAACTGTTCGGCGCCCTGTTTGAAACGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24510___yq    651 AAAAAATATCCGCAACGCTTTTGAACTGTTCGGCGCCCTGTTTGAAACGA    700

BSNT_03656___    701 TGAAGGATGCCCATGACGCAAGGCACATTGCATCACGCTATGAACAAAAT    750
                     ||||||||||.||||||||||||||||||||.||||||||||||||||||
BSU24510___yq    701 TGAAGGATGCTCATGACGCAAGGCACATTGCGTCACGCTATGAACAAAAT    750

BSNT_03656___    751 ATCATTTTTCTCCCGGTTGATGGCGTAATGGCAACTGATTTTCATTTAAC    800
                     ||||||||||||||.|||||||.|||||||||.|||||||||||||||||
BSU24510___yq    751 ATCATTTTTCTCCCTGTTGATGACGTAATGGCCACTGATTTTCATTTAAC    800

BSNT_03656___    801 ACAACAAAAAAAACTAGCCCTGATTGAGCTAGGTAAAAGACGGACAGAGC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24510___yq    801 ACAACAAAAAAAACTAGCCCTGATTGAGCTAGGTAAAAGACGGACAGAGC    850

BSNT_03656___    851 TGTTTTTAAAGCAGTGGACCTATTAA    876
                     ||||||||||||||||||||||||||
BSU24510___yq    851 TGTTTTTAAAGCAGTGGACCTATTAA    876


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