Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03655 and BSU24500

See Amino acid alignment / Visit BSNT_03655 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:35
# Commandline: needle
#    -asequence dna-align/BSNT_03655___yqhP.1.22522.seq
#    -bsequence dna-align/BSU24500___yqhP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03655___yqhP-BSU24500___yqhP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03655___yqhP-BSU24500___yqhP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03655___yqhP
# 2: BSU24500___yqhP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 396
# Identity:     394/396 (99.5%)
# Similarity:   394/396 (99.5%)
# Gaps:           0/396 ( 0.0%)
# Score: 1962.0
# 
#
#=======================================

BSNT_03655___      1 ATGAATCATCGTGTACAACCTATTATTGCTGTATTAATTGCGCTGGGAGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24500___yq      1 ATGAATCATCGTGTACAACCTATTATTGCTGTATTAATTGCGCTGGGAGC     50

BSNT_03655___     51 GTTCGGTTTCCTCTATGTGCTGGTAACCAATCCCGGAGAAATGGCAAAAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24500___yq     51 GTTCGGTTTCCTCTATGTGCTGGTAACCAATCCCGGAGAAATGGCAAAAA    100

BSNT_03655___    101 TGGCGGTAACCGTCATCGTGGCAGGTATCATTATTTATTTTATTGTGAAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24500___yq    101 TGGCGGTAACCGTCATCGTGGCAGGTATCATTATTTATTTTATTGTGAAA    150

BSNT_03655___    151 TATGTAATGAATCGAAATGCGGGCAGCGAAGGAGCAGCCTTCAAAAAAGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24500___yq    151 TATGTAATGAATCGAAATGCGGGCAGCGAAGGAGCAGCCTTCAAAAAAGC    200

BSNT_03655___    201 GGCGAAACAATCGCGGCGCCGGATGAAAGAACAAAAAGCAAAACACCGCG    250
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU24500___yq    201 GGCGAAACAATCACGGCGCCGGATGAAAGAACAAAAAGCAAAACACCGCG    250

BSNT_03655___    251 CCGGACATAAGGGACGTGTCAGCCACCTGCGAAGCGTTCCGAGCGCCAGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24500___yq    251 CCGGACATAAGGGACGTGTCAGCCACCTGCGAAGCGTTCCGAGCGCCAGC    300

BSNT_03655___    301 AAGCCTAAGCCGATGATTCTCAAGAAAAAAAGCCAGACTCAGCTGACTGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24500___yq    301 AAGCCTAAGCCGATGATTCTCAAGAAAAAAAGCCAGACTCAGCTGACTGT    350

BSNT_03655___    351 TATAGAAGGGAAAAAAAATAAAAAGAAAAACAGGGCGCTTTTTTAA    396
                     |||||||||||||||||||||||||||||||||.||||||||||||
BSU24500___yq    351 TATAGAAGGGAAAAAAAATAAAAAGAAAAACAGAGCGCTTTTTTAA    396


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