Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03653 and BSU24480

See Amino acid alignment / Visit BSNT_03653 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:35
# Commandline: needle
#    -asequence dna-align/BSNT_03653___yqhR.1.22522.seq
#    -bsequence dna-align/BSU24480___yqhR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03653___yqhR-BSU24480___yqhR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03653___yqhR-BSU24480___yqhR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03653___yqhR
# 2: BSU24480___yqhR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 537
# Identity:     535/537 (99.6%)
# Similarity:   535/537 (99.6%)
# Gaps:           0/537 ( 0.0%)
# Score: 2667.0
# 
#
#=======================================

BSNT_03653___      1 ATGATGACTAGCGAAAAAGATACAGAACAAAATGAAGAATTGAATGAGAA     50
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU24480___yq      1 ATGATGACAAGCGAAAAAGATACAGAACAAAATGAAGAATTGAATGAGAA     50

BSNT_03653___     51 GCAAAAGCCGCCTGTTTCAATGGCCGGCAGGGTGGCGGCAACAGGTTTTT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24480___yq     51 GCAAAAGCCGCCTGTTTCAATGGCCGGCAGGGTGGCGGCAACAGGTTTTT    100

BSNT_03653___    101 GCGGAGGCGTACTTTGGAGTTTCGTTGCTTATATCGCATATTTGTTTCAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24480___yq    101 GCGGAGGCGTACTTTGGAGTTTCGTTGCTTATATCGCATATTTGTTTCAT    150

BSNT_03653___    151 TTTTCCGAAATCAGCCCGAATATGATATTGCAGCCGTTTGTACTCGGAGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24480___yq    151 TTTTCCGAAATCAGCCCGAATATGATATTGCAGCCGTTTGTACTCGGAGA    200

BSNT_03653___    201 GTGGAAAAAACATGGGCTGGGAACGGTAATCAGCATCATTTTGATTGGAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24480___yq    201 GTGGAAAAAACATGGGCTGGGAACGGTAATCAGCATCATTTTGATTGGAG    250

BSNT_03653___    251 TAATTTCAATTGGCGCAGCATTTCTTTATTTTCTTCTATTGAAACGTTTA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24480___yq    251 TAATTTCAATTGGCGCAGCATTTCTTTATTTTCTTCTATTGAAACGTTTA    300

BSNT_03653___    301 AAAACAATGTGGCCGGGTATTTTATACGGCTTGGTGCTTTGGCTGCTCGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24480___yq    301 AAAACAATGTGGCCGGGTATTTTATACGGCTTGGTGCTTTGGCTGCTCGT    350

BSNT_03653___    351 GTTTTTTGTTTTTAATCCGATTTTTCCAGATGTGCGCACGGTGACCGAAC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24480___yq    351 GTTTTTTGTTTTTAATCCGATTTTTCCAGATGTGCGCACGGTGACCGAAC    400

BSNT_03653___    401 TGACATCAGATACAATTATTACGACCATTTGCATTTATTTGCTTTACGGG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24480___yq    401 TGACATCAGATACAATTATTACGACCATTTGCATTTATTTGCTTTACGGG    450

BSNT_03653___    451 CTGTTTGTCGGGTATTCCATTTCATTTGAATACAATGAGCTGAATTCGGA    500
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU24480___yq    451 CTGTTTGTCGGGTATTCTATTTCATTTGAATACAATGAGCTGAATTCGGA    500

BSNT_03653___    501 AAAGCTTGCACGTGCGCTGGGAATGCATAGAGAATAG    537
                     |||||||||||||||||||||||||||||||||||||
BSU24480___yq    501 AAAGCTTGCACGTGCGCTGGGAATGCATAGAGAATAG    537


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