Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_03652 and BSU24470

See Amino acid alignment / Visit BSNT_03652 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:35
# Commandline: needle
#    -asequence dna-align/BSNT_03652___yqhS.1.22522.seq
#    -bsequence dna-align/BSU24470___yqhS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03652___yqhS-BSU24470___yqhS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03652___yqhS-BSU24470___yqhS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03652___yqhS
# 2: BSU24470___yqhS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 447
# Identity:     445/447 (99.6%)
# Similarity:   445/447 (99.6%)
# Gaps:           0/447 ( 0.0%)
# Score: 2217.0
# 
#
#=======================================

BSNT_03652___      1 GTGCCTCATTTTTTGATTTTGAACGGACCGAATGTTAACCGGCTTGGGAG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24470___yq      1 GTGCCTCATTTTTTGATTTTGAACGGACCGAATGTTAACCGGCTTGGGAG     50

BSNT_03652___     51 TCGTGAGCCTGAAGTATTCGGCCGCCAGACACTGACCGATATTGAAACAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24470___yq     51 TCGTGAGCCTGAAGTATTCGGCCGCCAGACACTGACCGATATTGAAACAG    100

BSNT_03652___    101 ATCTTTTTCAGTTTGCTGAAGCCTTACATATCCAGCTCACTTTCTTCCAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24470___yq    101 ATCTTTTTCAGTTTGCTGAAGCCTTACATATCCAGCTCACTTTCTTCCAG    150

BSNT_03652___    151 TCTAATCACGAAGGTGATTTGATAGATGCGATACATGAGGCTGAGGAGCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24470___yq    151 TCTAATCACGAAGGTGATTTGATAGATGCGATACATGAGGCTGAGGAGCA    200

BSNT_03652___    201 ATACAGCGGGATTGTTCTGAACCCCGGCGCCCTGAGTCATTATAGCTATG    250
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU24470___yq    201 ATACAGCGGGATTGTTCTGAACCCCGGCGCCCTGAGTCATTACAGCTATG    250

BSNT_03652___    251 CGATCAGGGATGCTGTTTCAAGCATCAGTCTTCCTGTGGTAGAGGTGCAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24470___yq    251 CGATCAGGGATGCTGTTTCAAGCATCAGTCTTCCTGTGGTAGAGGTGCAT    300

BSNT_03652___    301 TTATCAAACTTATACGCCAGGGAAGAATTCAGGCAACAGTCGGTTATCGC    350
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU24470___yq    301 TTATCAAACTTATACGCCAGGGAAGAATTCAGGCATCAGTCGGTTATCGC    350

BSNT_03652___    351 TCCTGTTGCGAAAGGGCAGATTGTCGGTCTTGGAGCTGAAGGCTACAAGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24470___yq    351 TCCTGTTGCGAAAGGGCAGATTGTCGGTCTTGGAGCTGAAGGCTACAAGC    400

BSNT_03652___    401 TTGCTGTTCGCTACTTATTAAGCCAGCAAGGGGGAGAATCAAGATGA    447
                     |||||||||||||||||||||||||||||||||||||||||||||||
BSU24470___yq    401 TTGCTGTTCGCTACTTATTAAGCCAGCAAGGGGGAGAATCAAGATGA    447


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.