Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03609 and BSU24220

See Amino acid alignment / Visit BSNT_03609 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:31
# Commandline: needle
#    -asequence dna-align/BSNT_03609___spo0A.1.22522.seq
#    -bsequence dna-align/BSU24220___spo0A.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03609___spo0A-BSU24220___spo0A.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03609___spo0A-BSU24220___spo0A.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03609___spo0A
# 2: BSU24220___spo0A
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 804
# Identity:     801/804 (99.6%)
# Similarity:   801/804 (99.6%)
# Gaps:           0/804 ( 0.0%)
# Score: 3993.0
# 
#
#=======================================

BSNT_03609___      1 GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24220___sp      1 GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAG     50

BSNT_03609___     51 CCTGTTAAGTGAATATATAGAAGGACAGGAAGACATGGAAGTGATCGGCG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24220___sp     51 CCTGTTAAGTGAATATATAGAAGGACAGGAAGACATGGAAGTGATCGGCG    100

BSNT_03609___    101 TTGCTTATAACGGACAGGAATGCCTGTCGCTGTTTAAAGAAAAAGATCCC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24220___sp    101 TTGCTTATAACGGACAGGAATGCCTGTCGCTGTTTAAAGAAAAAGATCCC    150

BSNT_03609___    151 GATGTGCTCGTATTAGATATTATTATGCCGCATTTAGACGGACTTGCGGT    200
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU24220___sp    151 GATGTGCTCGTATTAGATATTATTATGCCGCATCTAGACGGACTTGCGGT    200

BSNT_03609___    201 TTTAGAGAGGCTGAGGGAATCAGATCTGAAAAAACAGCCGAATGTCATTA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24220___sp    201 TTTAGAGAGGCTGAGGGAATCAGATCTGAAAAAACAGCCGAATGTCATTA    250

BSNT_03609___    251 TGCTGACAGCCTTTGGGCAGGAAGATGTCACGAAAAAGGCCGTCGATTTA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24220___sp    251 TGCTGACAGCCTTTGGGCAGGAAGATGTCACGAAAAAGGCCGTCGATTTA    300

BSNT_03609___    301 GGCGCGTCCTACTTTATTCTCAAACCGTTTGATATGGAAAACCTTGTCGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24220___sp    301 GGCGCGTCCTACTTTATTCTCAAACCGTTTGATATGGAAAACCTTGTCGG    350

BSNT_03609___    351 TCATATCCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGTGCGC    400
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU24220___sp    351 CCATATCCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGTGCGC    400

BSNT_03609___    401 CATCATCGCAAAGCAGTATTATACGCAGCAGCCAGCCTGAACCAAAGAAG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24220___sp    401 CATCATCGCAAAGCAGTATTATACGCAGCAGCCAGCCTGAACCAAAGAAG    450

BSNT_03609___    451 AAAAATCTCGACGCGAGCATCACAAGCATTATCCATGAAATCGGCGTCCC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24220___sp    451 AAAAATCTCGACGCGAGCATCACAAGCATTATCCATGAAATCGGCGTCCC    500

BSNT_03609___    501 AGCCCATATTAAAGGCTATCTCTATCTGCGCGAAGCAATCTCAATGGTAT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24220___sp    501 AGCCCATATTAAAGGCTATCTCTATCTGCGCGAAGCAATCTCAATGGTAT    550

BSNT_03609___    551 ACAATGACATCGAATTGCTCGGCAGCATTACAAAAGTCCTCTATCCGGAC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24220___sp    551 ACAATGACATCGAATTGCTCGGCAGCATTACAAAAGTCCTCTATCCGGAC    600

BSNT_03609___    601 ATCGCCAAAAAATTTAACACAACCGCAAGCCGTGTAGAAAGAGCGATCCG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24220___sp    601 ATCGCCAAAAAATTTAACACAACCGCAAGCCGTGTAGAAAGAGCGATCCG    650

BSNT_03609___    651 TCATGCAATTGAAGTGGCATGGAGCAGAGGAAACATTGATTCCATTTCCT    700
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU24220___sp    651 CCATGCAATTGAAGTGGCATGGAGCAGAGGAAACATTGATTCCATTTCCT    700

BSNT_03609___    701 CGTTGTTTGGTTATACTGTCAGCATGACAAAAGCTAAACCTACCAACAGT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24220___sp    701 CGTTGTTTGGTTATACTGTCAGCATGACAAAAGCTAAACCTACCAACAGT    750

BSNT_03609___    751 GAATTCATTGCAATGGTTGCGGATAAGCTGAGGTTAGAGCATAAGGCTTC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24220___sp    751 GAATTCATTGCAATGGTTGCGGATAAGCTGAGGTTAGAGCATAAGGCTTC    800

BSNT_03609___    801 TTAA    804
                     ||||
BSU24220___sp    801 TTAA    804


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