Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03605 and BSU24210

See Amino acid alignment / Visit BSNT_03605 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:30
# Commandline: needle
#    -asequence dna-align/BSNT_03605___yqiG.1.22522.seq
#    -bsequence dna-align/BSU24210___yqiG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03605___yqiG-BSU24210___yqiG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03605___yqiG-BSU24210___yqiG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03605___yqiG
# 2: BSU24210___yqiG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1149
# Identity:    1108/1149 (96.4%)
# Similarity:  1108/1149 (96.4%)
# Gaps:          30/1149 ( 2.6%)
# Score: 5496.0
# 
#
#=======================================

BSNT_03605___      1 GTGCGAATCCAAACGAAAGAAGATGATCAAATGAATCCTAAGTATAAGCC     50
                                                   ||||||||||||||||||||
BSU24210___yq      1 ------------------------------ATGAATCCTAAGTATAAGCC     20

BSNT_03605___     51 ACTTTTTGAACCATTTACGTTTAAAAGCGGCGTTACAATCGACAACCGGA    100
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU24210___yq     21 ACTTTTTGAACCATTTACGTTTAAAAGCGGCGTTACAATCAACAACCGGA     70

BSNT_03605___    101 TCGCAGTAGCACCGATGACTCATTACGCTTCTAATGAAGACGGTACAATA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24210___yq     71 TCGCAGTAGCACCGATGACTCATTACGCTTCTAATGAAGACGGTACAATA    120

BSNT_03605___    151 TCTGAAGCGGAGCTCGACTACATCATCCCCCGTTCAAAAGAGATGGGAAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24210___yq    121 TCTGAAGCGGAGCTCGACTACATCATCCCCCGTTCAAAAGAGATGGGAAT    170

BSNT_03605___    201 GGTGATTACAGCCTGCGCAAATGTTACACCGGACGGAAAAGCATTCCCCG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24210___yq    171 GGTGATTACAGCCTGCGCAAATGTTACACCGGACGGAAAAGCATTCCCCG    220

BSNT_03605___    251 GGCAGCCGGCCATCCATGACGATTCCAACATTCCAGGTTTAAAAAAGTTA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24210___yq    221 GGCAGCCGGCCATCCATGACGATTCCAACATTCCAGGTTTAAAAAAGTTA    270

BSNT_03605___    301 GCACAAGCCATTCAGGCACAAGGCGCTAAAGCTGTTGTACAAATTCATCA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24210___yq    271 GCACAAGCCATTCAGGCACAAGGCGCTAAAGCTGTTGTACAAATTCATCA    320

BSNT_03605___    351 CGGCGGTATTGAGTGCCCGTCTGAGCTCGTTCCTCAACAGGATGTTGTGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24210___yq    321 CGGCGGTATTGAGTGCCCGTCTGAGCTCGTTCCTCAACAGGATGTTGTGG    370

BSNT_03605___    401 GGCCAAGTGACGTGTTTGATAACGGCAAACAAATTGCTCGCGCATTAAAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU24210___yq    371 GGCCAAGTGACGTGTTTGATAACGGCAAACAAATTGCTCGCGCATTAACA    420

BSNT_03605___    451 GAAGAAGAAGTGGAAAACATTGTGAAGGCTTTTGGAGAAGCGACAAGACG    500
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU24210___yq    421 GAAGAAGAAGTGGAAAACATTGTGAAGGCGTTTGGAGAAGCGACAAGACG    470

BSNT_03605___    501 CGCCATTGAAGCCGGCTTTGACGGTGTCGAAATTCACGGTGCAAACGGCT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24210___yq    471 CGCCATTGAAGCCGGCTTTGACGGTGTCGAAATTCACGGTGCAAACGGCT    520

BSNT_03605___    551 ACTTAATTCAGCAGTTTTATTCTCCGAAAACCAATCAGCGCACGGATCGC    600
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU24210___yq    521 ACTTAATTCAGCAGTTTTATTCTCCGAAAACCAACCAGCGCACGGATCGC    570

BSNT_03605___    601 TGGGGAGGAAGCGATGAAAAACGATTAGCCTTCCCGCTCGCTATTGTCGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24210___yq    571 TGGGGAGGAAGCGATGAAAAACGATTAGCCTTCCCGCTCGCTATTGTCGA    620

BSNT_03605___    651 TGAAGTGAAAAAAGCCGCTTCAGAACATGCGAAGGGTGCGTTCTTAGTCG    700
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU24210___yq    621 TGAAGTGAAAAAAGCCGCTTCAGAACATGCGAAGGGTGCATTCTTAGTCG    670

BSNT_03605___    701 GCTACCGTCTGTCTCCGGAAGAACCTGAGACACCGGGATTGACAATGACT    750
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU24210___yq    671 GCTACCGCCTGTCTCCGGAAGAACCTGAGACACCGGGATTGACAATGACT    720

BSNT_03605___    751 GAAACTTATACGCTTGTTGATGCTTTAGGGGATAAAGAATTGGATTATCT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24210___yq    721 GAAACTTATACGCTTGTTGATGCTTTAGGGGATAAAGAATTGGATTATCT    770

BSNT_03605___    801 TCATATCTCACTGATGGACGTGAACTCAAAAGCGCGCCGCGGTGCAGATC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24210___yq    771 TCATATCTCACTGATGGACGTGAACTCAAAAGCGCGCCGCGGTGCAGATC    820

BSNT_03605___    851 CGACTCGCACACGCATGGACTTATTGAATGAACGTGTCGGAAACAAAGTG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24210___yq    821 CGACTCGCACACGCATGGACTTATTGAATGAACGTGTCGGAAACAAAGTG    870

BSNT_03605___    901 CCGCTGATCGCCGTCGGTTCCATCCATTCCGCTGATGACGCGCTTGCCGT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24210___yq    871 CCGCTGATCGCCGTCGGTTCCATCCATTCCGCTGATGACGCGCTTGCCGT    920

BSNT_03605___    951 CATCGAAAACGGTATTCCGCTAGTCGCTATGGGACGCGAAATTCTAGTTG   1000
                     ||||||||||||||||||.||.||||||||||||||||||||||||||||
BSU24210___yq    921 CATCGAAAACGGTATTCCACTGGTCGCTATGGGACGCGAAATTCTAGTTG    970

BSNT_03605___   1001 ACCCTGACTGGACGGTAAAAGTAAAAGAAGGCCGTGAAAAGCAAATCGAA   1050
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU24210___yq    971 ACCCTAACTGGACGGTAAAAGTAAAAGAAGGCCGTGAAAAGCAAATCGAA   1020

BSNT_03605___   1051 ACAGTGATCAAAGGCACAGATAAAGAAAAATATCATTTGCCTGAACCGCT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24210___yq   1021 ACAGTGATCAAAGGCACAGATAAAGAAAAATATCATTTGCCTGAACCGCT   1070

BSNT_03605___   1101 ATGGCAAGCAATTGTGAACACGCCAGGCTGGGTGCCTTATAAAGATTAA   1149
                     |||||||||||||||||||||.|.|||||||||||||||||||||||||
BSU24210___yq   1071 ATGGCAAGCAATTGTGAACACACAAGGCTGGGTGCCTTATAAAGATTAA   1119


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