Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03602 and BSU24200

See Amino acid alignment / Visit BSNT_03602 in genome browser / Return to Orthologue table 
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:30
# Commandline: needle
#    -asequence dna-align/BSNT_03602___yqiH.1.22522.seq
#    -bsequence dna-align/BSU24200___yqiH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03602___yqiH-BSU24200___yqiH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03602___yqiH-BSU24200___yqiH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03602___yqiH
# 2: BSU24200___yqiH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 297
# Identity:     292/297 (98.3%)
# Similarity:   292/297 (98.3%)
# Gaps:           3/297 ( 1.0%)
# Score: 1452.0
# 
#
#=======================================

BSNT_03602___      1 GTGAAACAAACGGTTCTTTTGCTGTTTACTGCGCTCTTTCTTTCGGGGTG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24200___yq      1 GTGAAACAAACGGTTCTTTTGCTGTTTACTGCGCTCTTTCTTTCGGGGTG     50

BSNT_03602___     51 CAGTGTTGCAAGTGCGGATGACTCAGTGCCAAGGTTTACCGAAGAGGGAA    100
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU24200___yq     51 CAGTGTTGCAAGTGCGGATGACTCAGTGCCGAGGTTTACCGAAGAGGGAA    100

BSNT_03602___    101 AATACATTGGCTCGGCTGATCCTCATACGATTGCGGTTTCTCTTAATGGA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24200___yq    101 AATACATTGGCTCGGCTGATCCTCATACGATTGCGGTTTCTCTTAATGGA    150

BSNT_03602___    151 GAAGAAACCATGATACAAGTTCCGAAGGATAAACGTGATGAATGTGAATC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24200___yq    151 GAAGAAACCATGATACAAGTTCCGAAGGATAAACGTGATGAATGTGAATC    200

BSNT_03602___    201 ACTGCCAGATCAGACACATGTCCTGGTGAAATATACAAAGAAGGATAATG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24200___yq    201 ACTGCCAGATCAGACACATGTCCTGGTGAAATATACAAAGAAGGATAATG    250

BSNT_03602___    251 GAACTTTACAGCTGGAAGATATTCAGCTGCGAAAGAACTCGTCATAA    297
                     ||||||||||||||||||||||||||||||||||||||||||.|   
BSU24200___yq    251 GAACTTTACAGCTGGAAGATATTCAGCTGCGAAAGAACTCGTGA---    294


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