Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03601 and BSU24190

See Amino acid alignment / Visit BSNT_03601 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:30
# Commandline: needle
#    -asequence dna-align/BSNT_03601___yqiI.1.22522.seq
#    -bsequence dna-align/BSU24190___yqiI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03601___yqiI-BSU24190___yqiI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03601___yqiI-BSU24190___yqiI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03601___yqiI
# 2: BSU24190___yqiI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 621
# Identity:     595/621 (95.8%)
# Similarity:   595/621 (95.8%)
# Gaps:          21/621 ( 3.4%)
# Score: 2955.0
# 
#
#=======================================

BSNT_03601___      1 ---------------------TTGGCGCTGTGCGGATTGGCTTTGACGCT     29
                                          |||||||||||||||||||||||||||||
BSU24190___yq      1 TTGAGAATGTTATGGAGGAGCTTGGCGCTGTGCGGATTGGCTTTGACGCT     50

BSNT_03601___     30 CGCGCCTTGTGCACAGGCAGCAGAGCCGATAGAAGGGAAAACAGTGTATA     79
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24190___yq     51 CGCGCCTTGTGCACAGGCAGCAGAGCCGATAGAAGGGAAAACAGTGTATA    100

BSNT_03601___     80 TTGATGCCGGACACGGCGGTGAAGATAGTGGAGCGGTCGGAAACGGGCTC    129
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU24190___yq    101 TTGATGCCGGACACGGCGGTGAAGACAGTGGAGCGGTCGGAAACGGGCTC    150

BSNT_03601___    130 TTTGAAAAGGATATTAATTTGGCTGTCTCAGAGCATGTGACAGACAAACT    179
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24190___yq    151 TTTGAAAAGGATATTAATTTGGCTGTCTCAGAGCATGTGACAGACAAACT    200

BSNT_03601___    180 AAAAGAGGAGGGAGCCAATCCTGTTGCATCCCGGTCTGACGATCATTTTC    229
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24190___yq    201 AAAAGAGGAGGGAGCCAATCCTGTTGCATCCCGGTCTGACGATCATTTTC    250

BSNT_03601___    230 TGACCTTGGAGGAAAGAGTGGCTAAGGCAAGTGCCAATCAGGCTGACCTT    279
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24190___yq    251 TGACCTTGGAGGAAAGAGTGGCTAAGGCAAGTGCCAATCAGGCTGACCTT    300

BSNT_03601___    280 TTTGTCAGCATTCATGTGAATTCAGGGGTTGCTTCAGCTTCAGGAACAGA    329
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24190___yq    301 TTTGTCAGCATTCATGTGAATTCAGGGGTTGCTTCAGCTTCAGGAACAGA    350

BSNT_03601___    330 AACGTATTTTCAATCTGATTATGAAGGGGAGAACAGCCGGCGTCTGGCAT    379
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24190___yq    351 AACGTATTTTCAATCTGATTATGAAGGGGAGAACAGCCGGCGTCTGGCAT    400

BSNT_03601___    380 CCGATATTCAGTCACAGCTCGTTTCTTCCTTACAAACGAGAGACAGGGGC    429
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24190___yq    401 CCGATATTCAGTCACAGCTCGTTTCTTCCTTACAAACGAGAGACAGGGGC    450

BSNT_03601___    430 GTGAAAGAATCAGACTTTTACGTCATTACATATTCACAAATGCCAAGTGT    479
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24190___yq    451 GTGAAAGAATCAGACTTTTACGTCATTACATATTCACAAATGCCAAGTGT    500

BSNT_03601___    480 GTTGGCGGAGCTTGGGTTTATCACTAACAGTTCTGATGCGGACAAGCTGG    529
                     ||||||||||||||||||||||||.|||||.|||||.|||||||||||||
BSU24190___yq    501 GTTGGCGGAGCTTGGGTTTATCACGAACAGCTCTGACGCGGACAAGCTGG    550

BSNT_03601___    530 GAAGTGAAGAATACCAGCAAAAGGCCGCAGATGCGATTGTCAACGGCATT    579
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU24190___yq    551 GAAGTGAAGAATACCAGCAAAAGGCCGCAGATGCGATTGTCAATGGCATT    600

BSNT_03601___    580 GATTCTTATTATGATCAGTAG    600
                     |||||||||||||||||||||
BSU24190___yq    601 GATTCTTATTATGATCAGTAG    621


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