Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_03593 and BSU24130

See Amino acid alignment / Visit BSNT_03593 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:29
# Commandline: needle
#    -asequence dna-align/BSNT_03593___prpD.1.22522.seq
#    -bsequence dna-align/BSU24130___mmgE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03593___prpD-BSU24130___mmgE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03593___prpD-BSU24130___mmgE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03593___prpD
# 2: BSU24130___mmgE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1419
# Identity:    1400/1419 (98.7%)
# Similarity:  1400/1419 (98.7%)
# Gaps:           0/1419 ( 0.0%)
# Score: 6924.0
# 
#
#=======================================

BSNT_03593___      1 ATGCCGAAAACGGATCGTGTTATCGAAGAAATCACAGACTATGTGCTTGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24130___mm      1 ATGCCGAAAACGGATCGTGTTATCGAAGAAATCACAGACTATGTGCTTGA     50

BSNT_03593___     51 GAAAGAGATTACTAGTGCCGAAGCGTATACAACAGCGGGGCATGTATTGC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24130___mm     51 GAAAGAGATTACTAGTGCCGAAGCGTATACAACAGCGGGGCATGTATTGC    100

BSNT_03593___    101 TGGATACCCTGGGCTGCGGGATCTTGGCGCTACGGTATCCGGAATGCACA    150
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU24130___mm    101 TGGATACCCTGGGCTGCGGAATCTTGGCGCTACGGTATCCGGAATGCACA    150

BSNT_03593___    151 AAGCTGCTTGGCCCGATTGTTCCAGGAACGACTGTGCCGAATGGAAGCAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24130___mm    151 AAGCTGCTTGGCCCGATTGTTCCAGGAACGACTGTGCCGAATGGAAGCAA    200

BSNT_03593___    201 AGTGCCGGGAACGTCATATGTTCTCGATCCTGTGAGGGCAGCGTTTAATA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24130___mm    201 AGTGCCGGGAACGTCATATGTTCTCGATCCTGTGAGGGCAGCGTTTAATA    250

BSNT_03593___    251 TCGGCTGCATGATTCGCTGGCTCGATTACAACGATACGTGGCTGGCGGCG    300
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU24130___mm    251 TTGGCTGCATGATTCGCTGGCTCGATTACAACGATACGTGGCTGGCGGCG    300

BSNT_03593___    301 GAGTGGGGGCATCCATCCGATAACTTGGGAGGAATCCTTGCCGCTGCTGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24130___mm    301 GAGTGGGGGCATCCATCCGATAACTTGGGAGGAATCCTTGCCGCTGCTGA    350

BSNT_03593___    351 TTATGTATCAAGAGTGAGGCTGTCTGAAGGAAAAGAGCCGTTAACAGTAA    400
                     |||||||||||||||||||||||||||||||||||||||||||||.|||.
BSU24130___mm    351 TTATGTATCAAGAGTGAGGCTGTCTGAAGGAAAAGAGCCGTTAACGGTAC    400

BSNT_03593___    401 GCGACGTACTTGAGATGATGATCAAAGCACACGAGATCCAAGGTGTGCTG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24130___mm    401 GCGACGTACTTGAGATGATGATCAAAGCACACGAGATCCAAGGTGTGCTG    450

BSNT_03593___    451 GCGTTAGAAAACAGCTTAAATCGAGTTGGCCTTGACCATGTGCTGTTTGT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24130___mm    451 GCGTTAGAAAACAGCTTAAATCGAGTTGGCCTTGACCATGTGCTGTTTGT    500

BSNT_03593___    501 CAAAGTTGCGACAACCGCTGTTGCGGCAAAGCTTTTGGGCGGCGGAAGAG    550
                     |||||||||||||||.||||||||.|||||||||||||||||||||||||
BSU24130___mm    501 CAAAGTTGCGACAACTGCTGTTGCAGCAAAGCTTTTGGGCGGCGGAAGAG    550

BSNT_03593___    551 AAGAAATCAAAAATGCGCTTTCGAATGCATGGATTGACAATGCAGCATTG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24130___mm    551 AAGAAATCAAAAATGCGCTTTCGAATGCATGGATTGACAATGCAGCATTG    600

BSNT_03593___    601 AGGACATACCGCCATTCACCAAATACAGGCTCGCGTAAATCATGGGCGGC    650
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU24130___mm    601 AGGACATACCGCCATTCACCGAATACAGGCTCGCGTAAATCATGGGCGGC    650

BSNT_03593___    651 AGGAGATGCAACGAGCAGAGGTGTTCATTTGGCGCTGATGTCGTTAAAAG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24130___mm    651 AGGAGATGCAACGAGCAGAGGTGTTCATTTGGCGCTGATGTCGTTAAAAG    700

BSNT_03593___    701 GGGAAATGGGTTATCCGACAGCCTTGAGTGCACCGGGTTGGGGGTTCCAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24130___mm    701 GGGAAATGGGTTATCCGACAGCCTTGAGTGCACCGGGTTGGGGGTTCCAA    750

BSNT_03593___    751 GACGTTTTATTCAATAAGAAAGAGATCAAGCTTGCCTGTCCGCTCGACGC    800
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU24130___mm    751 GACGTTTTATTCAATAAGAAAGAGATCAAGCTTGCCCGTCCGCTCGACGC    800

BSNT_03593___    801 TTATGTCATGGAAAATGTGTTATTTAAAGTGTCTTATCCTGCGGAATTTC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24130___mm    801 TTATGTCATGGAAAATGTGTTATTTAAAGTGTCTTATCCTGCGGAATTTC    850

BSNT_03593___    851 ACGCCCAGACAGCGGCGGAGTGCGCCGTCATTCTTCACCCGCAGGTAAAG    900
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU24130___mm    851 ACGCCCAGACAGCGGCGGAGTCCGCCGTCATTCTTCACCCGCAGGTAAAG    900

BSNT_03593___    901 AACCGGATTGACGAGATTGACCGTGTTGTCATCAGAACGCATGAATCCGC    950
                     |||||||||||||||||||||||.|||||||||||||||||||||||.||
BSU24130___mm    901 AACCGGATTGACGAGATTGACCGAGTTGTCATCAGAACGCATGAATCAGC    950

BSNT_03593___    951 TATCCGAATCATTGATAAAAAAGGCCCGCTCCACAATCCGGCAGACCGTG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24130___mm    951 TATCCGAATCATTGATAAAAAAGGCCCGCTCCACAATCCGGCAGACCGTG   1000

BSNT_03593___   1001 ATCACTGCCTCCAATACATTACAGCAATCGGTTTGCTTTTTGGTGATATC   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24130___mm   1001 ATCACTGCCTCCAATACATTACAGCAATCGGTTTGCTTTTTGGTGATATC   1050

BSNT_03593___   1051 ACGGCACAGCATTATGAAGCTGAAACAGCGAGTGATCCGAGAATAGATAA   1100
                     ||.||||||||||||||||||||||||||||.||||||||||||||||||
BSU24130___mm   1051 ACCGCACAGCATTATGAAGCTGAAACAGCGAATGATCCGAGAATAGATAA   1100

BSNT_03593___   1101 ACTTCGTGATAAAATGGAGGTGACTGAAAATAAAACATATACCGAGGATT   1150
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU24130___mm   1101 ACTTCGTGATAAAATGGAAGTGACTGAAAATAAAACATATACCGAGGATT   1150

BSNT_03593___   1151 ATTTGAAACCTGATAAACGTTCCATCTCAAATGCCGTTCAGGTTCATTTT   1200
                     |||||||.|||||||||||.||||||||||||||||||||||||||||||
BSU24130___mm   1151 ATTTGAAGCCTGATAAACGCTCCATCTCAAATGCCGTTCAGGTTCATTTT   1200

BSNT_03593___   1201 AAAGACGGAACGAGCACGGAAATGGTGGAATGTGAGTTTCCCCTCGGCCA   1250
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU24130___mm   1201 AAAGATGGAACGAGCACGGAAATGGTGGAATGTGAGTTTCCCCTCGGCCA   1250

BSNT_03593___   1251 TCGTTTTCGAAGAGAGGAAGCAGTGCCGAAACTGTTGGAAAAGTTTTCTG   1300
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU24130___mm   1251 TCGTTTTCGAAGAGAGGAAGCAGTGCCGAAACTGCTGGAAAAGTTTTCTG   1300

BSNT_03593___   1301 ACAATCTCAAAACCCATTATCCTGATAAACAGCACAAACACATTTATGAG   1350
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU24130___mm   1301 ACAATCTCAAAACCCATTTTCCTGATAAACAGCACAAACACATTTATGAG   1350

BSNT_03593___   1351 CGCTGTACCAGCTATGAGACATTACAAACGATGCGCGTAAATGAATTCGT   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24130___mm   1351 CGCTGTACCAGCTATGAGACATTACAAACGATGCGCGTAAATGAATTCGT   1400

BSNT_03593___   1401 AGACATGTTCTGCATGTAA   1419
                     |||||||||||||||||||
BSU24130___mm   1401 AGACATGTTCTGCATGTAA   1419


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.