Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03577 and BSU24020

See Amino acid alignment / Visit BSNT_03577 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:27
# Commandline: needle
#    -asequence dna-align/BSNT_03577___bmrR.1.22522.seq
#    -bsequence dna-align/BSU24020___bmrR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03577___bmrR-BSU24020___bmrR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03577___bmrR-BSU24020___bmrR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03577___bmrR
# 2: BSU24020___bmrR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 837
# Identity:     827/837 (98.8%)
# Similarity:   827/837 (98.8%)
# Gaps:           0/837 ( 0.0%)
# Score: 4095.0
# 
#
#=======================================

BSNT_03577___      1 ATGAAGGAATCGTATTACTCAATTGGGGAAGTATCAAAACTGGCAAACGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24020___bm      1 ATGAAGGAATCGTATTACTCAATTGGGGAAGTATCAAAACTGGCAAACGT     50

BSNT_03577___     51 GTCGATAAAAGCGCTCCGTTATTACGATAAAATTGATTTATTTAAACCCG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU24020___bm     51 GTCGATAAAAGCGCTCCGTTATTACGATAAAATTGATTTATTTAAACCAG    100

BSNT_03577___    101 CCTACGTCGACCCGGATACCAGCTACCGCTATTATACAGATTCTCAGCTC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24020___bm    101 CCTACGTCGACCCGGATACCAGCTACCGCTATTATACAGATTCTCAGCTC    150

BSNT_03577___    151 ATTCATCTGGATTTGATCAAATCATTGAAATATATCGGCACACCTTTAGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24020___bm    151 ATTCATCTGGATTTGATCAAATCATTGAAATATATCGGCACACCTTTAGA    200

BSNT_03577___    201 GGAGATGAAAAAAGCACAGGACTTAGAGATGGAAGAACTGTTTGCTTTTT    250
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU24020___bm    201 AGAGATGAAAAAAGCACAGGACTTAGAGATGGAAGAACTGTTTGCTTTTT    250

BSNT_03577___    251 ATACAGAGCAGGAGAGGCAAATCAGGGAGAAATTAGACTTTTTATCAGCA    300
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU24020___bm    251 ATACAGAGCAGGAGAGGCAAATCAGGGAGAAATTAGACTTTTTATCAGCC    300

BSNT_03577___    301 CTGGAGCAAACCATTTCATTGGTGAAAAAGCGGATGAAACGGCAGATGGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24020___bm    301 CTGGAGCAAACCATTTCATTGGTGAAAAAGCGGATGAAACGGCAGATGGA    350

BSNT_03577___    351 ATATCCCGCGCTCGGTGAGGTGTTTGTTTTAGATGAAGAAGAAATACGGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24020___bm    351 ATATCCCGCGCTCGGTGAGGTGTTTGTTTTAGATGAAGAAGAAATACGGA    400

BSNT_03577___    401 TCATTCAGACAGAGGCAGAAGGAATCGGGCCTGAAAACGTGCTCAATGCC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU24020___bm    401 TCATTCAGACAGAGGCAGAAGGAATCGGGCCTGAAAACGTGCTCAACGCC    450

BSNT_03577___    451 TCCTACAGCAAATTAAAAAAATTTATCGAGTCAGCAGATGGATTTACGAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24020___bm    451 TCCTACAGCAAATTAAAAAAATTTATCGAGTCAGCAGATGGATTTACGAA    500

BSNT_03577___    501 CAATAGCTACGGCGCTACTTTCTCTTTTCAGCCCTACACCAGCATTGATG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24020___bm    501 CAATAGCTACGGCGCTACTTTCTCTTTTCAGCCCTACACCAGCATTGATG    550

BSNT_03577___    551 AAATGACTTACCGTCATATTTTCACGCCTGTATTGACGAATAAACAGATT    600
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU24020___bm    551 AAATGACTTACCGTCATATTTTCACACCTGTATTGACGAATAAACAGATT    600

BSNT_03577___    601 TCATCAATTACGCCGGATATGGAAATCACAACGATCCCTAAAGGGAGGTA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24020___bm    601 TCATCAATTACGCCGGATATGGAAATCACAACGATCCCTAAAGGGAGGTA    650

BSNT_03577___    651 TGCGTGTATCGCGTATAATTTTTCGCCTGAACATTATTTTCTCAACTTAC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24020___bm    651 TGCGTGTATCGCGTATAATTTTTCGCCTGAACATTATTTTCTCAACTTAC    700

BSNT_03577___    701 AGAAGCTTATCAAGTATATCGCAGACCGCCAATTAACAGTTGTCAGTGAT    750
                     |||||||||||||.||||||||.|||||||||||||||||||||||||||
BSU24020___bm    701 AGAAGCTTATCAAATATATCGCGGACCGCCAATTAACAGTTGTCAGTGAT    750

BSNT_03577___    751 GTTTACGAGTTAATCATACCGATTCATTACTCCCCGAAAAAACAAGAAGA    800
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU24020___bm    751 GTATACGAGTTAATCATACCGATTCATTACTCCCCGAAAAAACAAGAAGA    800

BSNT_03577___    801 ATATCGTGTCGAAATGAAAATACGAATCGCTGAATAA    837
                     ||||||.|||||||||||||||||.||||||||||||
BSU24020___bm    801 ATATCGAGTCGAAATGAAAATACGGATCGCTGAATAA    837


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