Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03562 and BSU23940

See Amino acid alignment / Visit BSNT_03562 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:25
# Commandline: needle
#    -asequence dna-align/BSNT_03562___yqjB.1.22522.seq
#    -bsequence dna-align/BSU23940___yqjB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03562___yqjB-BSU23940___yqjB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03562___yqjB-BSU23940___yqjB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03562___yqjB
# 2: BSU23940___yqjB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 531
# Identity:     524/531 (98.7%)
# Similarity:   524/531 (98.7%)
# Gaps:           0/531 ( 0.0%)
# Score: 2592.0
# 
#
#=======================================

BSNT_03562___      1 ATGCGTTTTTTCTTATGTTCGATTTTTATGATGATTTCACCGATTTGGCC     50
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU23940___yq      1 ATGCGTTTTTTCTTATGTTCGATTTTCATGATGATTTCACCGATTTGGCC     50

BSNT_03562___     51 GCTCGGCGAAAATCCGCTGCCGGGTGATCCATATGTTATTGTCAACAAGC    100
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU23940___yq     51 GCTCGGCGAAAATCCGCTGCCGGGTGATCCGTATGTTATTGTCAACAAGC    100

BSNT_03562___    101 GAACAAATGAACTTGCTGTTATCCTCGACAACAGAGTAGAAGGCGTGTAT    150
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU23940___yq    101 GAACAAATGAACTTGCTGTTATCCTCGACAACAAAGTAGAAGGCGTGTAT    150

BSNT_03562___    151 AGTGTGGCGACTGGAAAAACAGATGATTTGACGCCTGAAGGAGAGTTTTC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23940___yq    151 AGTGTGGCGACTGGAAAAACAGATGATTTGACGCCTGAAGGAGAGTTTTC    200

BSNT_03562___    201 GGTAACGGTAAAAGCGGAAAATCCTTACTACAGAAAGAAAAATATTGAAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23940___yq    201 GGTAACGGTAAAAGCGGAAAATCCTTACTACAGAAAGAAAAATATTGAAG    250

BSNT_03562___    251 GGGGATCTCCTGACAACCCGCTTGGGGCCAGATGGATCGGATTTGACGCG    300
                     |||||||||||||.||||||||||||||.|||||||||||||||||||||
BSU23940___yq    251 GGGGATCTCCTGATAACCCGCTTGGGGCAAGATGGATCGGATTTGACGCG    300

BSNT_03562___    301 AAAGGAACGGACGGGCGGATTTATGGAATTCATGGGACAAACCGAGAGGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23940___yq    301 AAAGGAACGGACGGGCGGATTTATGGAATTCATGGGACAAACCGAGAGGA    350

BSNT_03562___    351 ATCAGTAGGGAAATTTGTGTCTAACGGCTGTATACGTATGCATAACGATG    400
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU23940___yq    351 ATCAGTAGGAAAATTTGTGTCTAACGGCTGTATACGTATGCATAACGATG    400

BSNT_03562___    401 AGGTCGTTCATTTGTTTCAAACGATACCAGTAGGAACGAGAGTGCTGATC    450
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU23940___yq    401 AGGTTGTTCATTTGTTTCAAACGATACCAGTAGGAACGAGAGTGCTGATC    450

BSNT_03562___    451 ACGGACGACAACCGCTCTTTTGAGGAGATTGCCATCGAGCATAAAGCTCT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23940___yq    451 ACGGACGACAACCGCTCTTTTGAGGAGATTGCCATCGAGCATAAAGCTCT    500

BSNT_03562___    501 GATAAAAAAGCAGGATATTCCCATTGAATAA    531
                     |||||||||||||||||||||||||||||||
BSU23940___yq    501 GATAAAAAAGCAGGATATTCCCATTGAATAA    531


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