Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03553 and BSU23890

See Amino acid alignment / Visit BSNT_03553 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:25
# Commandline: needle
#    -asequence dna-align/BSNT_03553___yqjG.1.22522.seq
#    -bsequence dna-align/BSU23890___yqjG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03553___yqjG-BSU23890___yqjG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03553___yqjG-BSU23890___yqjG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03553___yqjG
# 2: BSU23890___yqjG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 828
# Identity:     814/828 (98.3%)
# Similarity:   814/828 (98.3%)
# Gaps:           0/828 ( 0.0%)
# Score: 4014.0
# 
#
#=======================================

BSNT_03553___      1 TTGTTAAAAACATATCAAAAACTTTTGGCTATGGGTATCTTTTTGATCGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23890___yq      1 TTGTTAAAAACATATCAAAAACTTTTGGCTATGGGTATCTTTTTGATCGT     50

BSNT_03553___     51 ATTATGCTCGGGCAATGCTGCATTTGCAGCGACTAATCAGGTGGGAGGCC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23890___yq     51 ATTATGCTCGGGCAATGCTGCATTTGCAGCGACTAATCAGGTGGGAGGCC    100

BSNT_03553___    101 TCAGCAACGTAGGTTTTTTCCACGATTATTTAATCGAACCGTTTTCCGCT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23890___yq    101 TCAGCAACGTAGGTTTTTTCCACGATTATTTAATCGAACCGTTTTCCGCT    150

BSNT_03553___    151 CTGCTTAAGGGTGTTGCCGGGCTGTTTCACGGAGAATACGGACTCTCTAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23890___yq    151 CTGCTTAAGGGTGTTGCCGGGCTGTTTCACGGAGAATACGGACTCTCTAT    200

BSNT_03553___    201 TATCCTCGTAACCATTATTGTGCGTATAGTTGTATTGCCTTTGTTTGTCA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23890___yq    201 TATCCTCGTAACCATTATTGTGCGTATAGTTGTATTGCCTTTGTTTGTCA    250

BSNT_03553___    251 ATCAGTTCAAAAAACAGCGCATCTTCCAAGAGAAAATGGCCGTTATTAAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23890___yq    251 ATCAGTTCAAAAAACAGCGCATCTTCCAAGAGAAAATGGCCGTTATTAAA    300

BSNT_03553___    301 CCTCAGGTTGACAGTATCCAGGTTAAATTGAAAAAGACGAAGGACCCTGA    350
                     ||||||||||||||||||||||||||.||||||||||||||||||||.||
BSU23890___yq    301 CCTCAGGTTGACAGTATCCAGGTTAAGTTGAAAAAGACGAAGGACCCGGA    350

BSNT_03553___    351 AAAACAAAAAGAGCTGCAAATGGAAATGATGAAGCTGTATCAAGAGAACA    400
                     |||.||||||||||||||||||||||||||||||||||||||.|||.|.|
BSU23890___yq    351 AAAGCAAAAAGAGCTGCAAATGGAAATGATGAAGCTGTATCAGGAGCATA    400

BSNT_03553___    401 ACATCAATCCGCTTGCGATGGGCTGTCTTCCAATGCTGATTCAGTCTCCG    450
                     |.|||||.||||||||||||||||||||||||||||||||||||||||||
BSU23890___yq    401 ATATCAACCCGCTTGCGATGGGCTGTCTTCCAATGCTGATTCAGTCTCCG    450

BSNT_03553___    451 ATTATGATTGGGCTTTATTACGCGATTCGCTCAACACCTGAAATTGCGTC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23890___yq    451 ATTATGATTGGGCTTTATTACGCGATTCGCTCAACACCTGAAATTGCGTC    500

BSNT_03553___    501 ACACTCGTTTCTATGGTTCAGTTTAGGGCAATCTGATATTCTCATGTCCC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23890___yq    501 ACACTCGTTTCTATGGTTCAGTTTAGGGCAATCTGATATTCTCATGTCCC    550

BSNT_03553___    551 TTAGTGCAGGGATTATGTATTTTGTCCAAGCCTATATCGCTCAAAAACTG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23890___yq    551 TTAGTGCAGGGATTATGTATTTTGTCCAAGCCTATATCGCTCAAAAACTG    600

BSNT_03553___    601 AGCGCGAAATATTCCGCTGTCCCGCAAAACCCAGCGGCACAGCAATCCGC    650
                     ||||||||||||||||||||||||||||||||.||.||.|||||||||||
BSU23890___yq    601 AGCGCGAAATATTCCGCTGTCCCGCAAAACCCTGCAGCGCAGCAATCCGC    650

BSNT_03553___    651 AAAATTGATGGTGTTCATCTTCCCTGTAATGATGACGATTTTCTCGCTTA    700
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU23890___yq    651 AAAATTGATGGTGTTCATCTTCCCTGTGATGATGACGATTTTCTCGCTTA    700

BSNT_03553___    701 ATGTTCCGGCAGCCCTTCCCCTGTACTGGTTTACAAGCGGACTGTTTTTG    750
                     ||||.||||||||||||||.||||||||||||||||||||||||||||||
BSU23890___yq    701 ATGTGCCGGCAGCCCTTCCGCTGTACTGGTTTACAAGCGGACTGTTTTTG    750

BSNT_03553___    751 ACAGTGCAAAACATCGTCCTTCAGATGACGCATCATAAAAGTAAAAAAAC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23890___yq    751 ACAGTGCAAAACATCGTCCTTCAGATGACGCATCATAAAAGTAAAAAAAC    800

BSNT_03553___    801 AGCCGCTCTTACTGAGTCGGTGAAATAA    828
                     ||||||||||||||||||||||||||||
BSU23890___yq    801 AGCCGCTCTTACTGAGTCGGTGAAATAA    828


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