Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03536 and BSU23780

See Amino acid alignment / Visit BSNT_03536 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:22
# Commandline: needle
#    -asequence dna-align/BSNT_03536___yqjQ.1.22522.seq
#    -bsequence dna-align/BSU23780___yqjQ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03536___yqjQ-BSU23780___yqjQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03536___yqjQ-BSU23780___yqjQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03536___yqjQ
# 2: BSU23780___yqjQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 780
# Identity:     771/780 (98.8%)
# Similarity:   771/780 (98.8%)
# Gaps:           0/780 ( 0.0%)
# Score: 3819.0
# 
#
#=======================================

BSNT_03536___      1 GTGAAACATATAGCGGGAAAAAGGATTTGGATAACCGGCGCTTCAGGAGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23780___yq      1 GTGAAACATATAGCGGGAAAAAGGATTTGGATAACCGGCGCTTCAGGAGG     50

BSNT_03536___     51 GCTTGGTGAAAGAATCGCATACTTATGCGCGGCTGAAGGAGCCCATGTCC    100
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU23780___yq     51 GCTTGGAGAAAGAATCGCATACTTATGCGCGGCTGAAGGAGCCCATGTCC    100

BSNT_03536___    101 TGCTGTCGGCTAGACGCGAGGATCGTTTGATAGAAATCAAAAGGAAAATA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23780___yq    101 TGCTGTCGGCTAGACGCGAGGATCGTTTGATAGAAATCAAAAGGAAAATA    150

BSNT_03536___    151 ACCGAGGAATGGAGCGGACAGTGTGAGATTTTTCCTCTGGATGTCGGCCG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23780___yq    151 ACCGAGGAATGGAGCGGACAGTGTGAGATTTTTCCTCTGGATGTCGGCCG    200

BSNT_03536___    201 CCTAGAGGATATTGCCCGGGTCCGCGATCAGATCGGCTCGGTTGATGTAC    250
                     ||||||||||||.|||||||||||||||||||||||||||.|||||||||
BSU23780___yq    201 CCTAGAGGATATCGCCCGGGTCCGCGATCAGATCGGCTCGATTGATGTAC    250

BSNT_03536___    251 TGATTAACAATGCGGGCTTCGGTATATTTGAAACGGTTTTAGACTCTACA    300
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU23780___yq    251 TGATTAACAATGCAGGCTTCGGTATATTTGAAACGGTTTTAGACTCTACA    300

BSNT_03536___    301 TTGGATGACATGAAAGCGATGTTTGATGTGAATGTCTTCGGCCTGATCGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23780___yq    301 TTGGATGACATGAAAGCGATGTTTGATGTGAATGTCTTCGGCCTGATCGC    350

BSNT_03536___    351 CTGTACAAAAGCGGTGCTTCCGCAAATGCTTGAGCAAAAAAAGGGACATA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23780___yq    351 CTGTACAAAAGCGGTGCTTCCGCAAATGCTTGAGCAAAAAAAGGGACATA    400

BSNT_03536___    401 TCATCAATATCGCCTCTCAAGCGGGGAAAATCGCAACACCGAAGTCTAGC    450
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU23780___yq    401 TCATCAATATCGCCTCTCAAGCGGGGAAAATCGCCACACCGAAGTCTAGC    450

BSNT_03536___    451 CTGTATTCCGCTACCAAACATGCCGTGTTAGGTTACTCAAACGCTTTGCG    500
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU23780___yq    451 CTGTATTCCGCGACCAAACATGCCGTGTTAGGTTACTCAAACGCTTTGCG    500

BSNT_03536___    501 GATGGAGCTTTCGGGAACCGGCATTTATGTGACAACAGTCAACCCGGGAC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU23780___yq    501 GATGGAGCTTTCGGGAACCGGCATTTATGTGACAACAGTCAACCCGGGCC    550

BSNT_03536___    551 CGATTCAGACGGACTTTTTTTCCATTGCTGATAAAGGCGGGGACTACGCC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23780___yq    551 CGATTCAGACGGACTTTTTTTCCATTGCTGATAAAGGCGGGGACTACGCC    600

BSNT_03536___    601 AAAAATGTCGGCCGCTGGATGCTTGATCCTGATGACGTAGCAGCTCAAAT    650
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU23780___yq    601 AAAAATGTCGGCCGCTGGATGCTTGATCCTGATGACGTGGCAGCTCAAAT    650

BSNT_03536___    651 TACAGCTGCAATTTTTACGAAAAAGCGGGAGATCAATCTTCCGCGTTTAA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23780___yq    651 TACAGCTGCAATTTTTACGAAAAAGCGGGAGATCAATCTTCCGCGTTTAA    700

BSNT_03536___    701 TGAATGCCGGCACTAAGCTGTATCAGCTGTTTCCAGCTCTTGTAGAAAAG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23780___yq    701 TGAATGCCGGCACTAAGCTGTATCAGCTGTTTCCAGCTCTTGTAGAAAAG    750

BSNT_03536___    751 CTGGCAGGACGCGCGTTCATGAAAAAATAA    780
                     |||||||||||||||.||||||||||||||
BSU23780___yq    751 CTGGCAGGACGCGCGCTCATGAAAAAATAA    780


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