Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03532 and BSU23750
See
Amino acid alignment /
Visit
BSNT_03532 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:22
# Commandline: needle
# -asequence dna-align/BSNT_03532___yqjT.1.22522.seq
# -bsequence dna-align/BSU23750___yqjT.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03532___yqjT-BSU23750___yqjT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03532___yqjT-BSU23750___yqjT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03532___yqjT
# 2: BSU23750___yqjT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 387
# Identity: 380/387 (98.2%)
# Similarity: 380/387 (98.2%)
# Gaps: 0/387 ( 0.0%)
# Score: 1872.0
#
#
#=======================================
BSNT_03532___ 1 GTGCATCATATCGAACTGTATGTCTCTGATTTGGAGGCGTCTAGGCGGTT 50
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU23750___yq 1 GTGCATCATATTGAACTGTATGTCTCTGATTTGGAGGCGTCTAGGCGGTT 50
BSNT_03532___ 51 TTGGGGATGGTTCTTAAAAGAACTTGGCTATAAAGAGTATCAAAAATGGA 100
||||||.||||||||||||||||||||.||||||||||||||||||||||
BSU23750___yq 51 TTGGGGCTGGTTCTTAAAAGAACTTGGTTATAAAGAGTATCAAAAATGGA 100
BSNT_03532___ 101 GCTCAGGCATCAGCTGGAAGAAAGATCGTTTTTACCTAGTGATTGTGCAG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23750___yq 101 GCTCAGGCATCAGCTGGAAGAAAGATCGTTTTTACCTAGTGATTGTGCAG 150
BSNT_03532___ 151 GCGAAAGAGCCATTTCTAGAGCCGGAATACCATAGATGCCGAGTCGGTCT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23750___yq 151 GCGAAAGAGCCATTTCTAGAGCCGGAATACCATAGATGCCGAGTCGGTCT 200
BSNT_03532___ 201 GAACCATCTCGCATTTCATGCTGAATCCAAGCTTCAAGTCGATCAGATGA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23750___yq 201 GAACCATCTCGCATTTCATGCTGAATCCAAGCTTCAAGTCGATCAGATGA 250
BSNT_03532___ 251 CTGAAAAATTGACGGCAAAAGGTTATCGTGTGTTGTACCGAGAGAGGCAT 300
||||||||||||||||||||||.||||||||||||||||||||.||||||
BSU23750___yq 251 CTGAAAAATTGACGGCAAAAGGCTATCGTGTGTTGTACCGAGACAGGCAT 300
BSNT_03532___ 301 CCTTTTGCCGGAGGAGACGGGCATTATGCAGTCTATTGTGAGGATCCGGA 350
||||||||||||||||||||||||||||||||||.||||||||||||.||
BSU23750___yq 301 CCTTTTGCCGGAGGAGACGGGCATTATGCAGTCTTTTGTGAGGATCCAGA 350
BSNT_03532___ 351 CCGGATTAAGGTAGAGCTCGTTGCCCCAAGCTGTTAA 387
|||||||||||||||||||||||||||||||||||||
BSU23750___yq 351 CCGGATTAAGGTAGAGCTCGTTGCCCCAAGCTGTTAA 387
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.