Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03523 and BSU23680

See Amino acid alignment / Visit BSNT_03523 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:21
# Commandline: needle
#    -asequence dna-align/BSNT_03523___yqjZ.1.22522.seq
#    -bsequence dna-align/BSU23680___yqjZ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03523___yqjZ-BSU23680___yqjZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03523___yqjZ-BSU23680___yqjZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03523___yqjZ
# 2: BSU23680___yqjZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity:     337/345 (97.7%)
# Similarity:   337/345 (97.7%)
# Gaps:           3/345 ( 0.9%)
# Score: 1665.0
# 
#
#=======================================

BSNT_03523___      1 ---ATGGATTTTTTATCAAAAACACCTGAGCCTCCTTACTATGCAGTCAT     47
                        |||||||||||||||||||||||||||||||||||||||||||||||
BSU23680___yq      1 ATGATGGATTTTTTATCAAAAACACCTGAGCCTCCTTACTATGCAGTCAT     50

BSNT_03523___     48 TTTTTCTTCTGTCAAAAGCGAAAATGACACAGGATATGGAGAAACAGCGG     97
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23680___yq     51 TTTTTCTTCTGTCAAAAGCGAAAATGACACAGGATATGGAGAAACAGCGG    100

BSNT_03523___     98 AGCGGATGGTATCGCTTGCGGCGGATCAGCCTGGATTTTTAGGCGTGGAA    147
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU23680___yq    101 AGCGGATGGTATCACTTGCGGCGGATCAGCCTGGATTTTTAGGCGTGGAA    150

BSNT_03523___    148 AGCGTACGTGAAGCGGATGGAAGGGGCATCACAGTTTCCTATTGGGACAG    197
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23680___yq    151 AGCGTACGTGAAGCGGATGGAAGGGGCATCACAGTTTCCTATTGGGACAG    200

BSNT_03523___    198 TATGGACGCAATTAACCATTGGAAGCATCACACTGAACATCAAGCAGCAA    247
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU23680___yq    201 TATGGACGCAATTAACCATTGGAGGCATCACACTGAACATCAAGCAGCAA    250

BSNT_03523___    248 AAGAAAAAGGAAAAAGCGTTTGGTACGAGTCGTATGCAGTCCGCGTCGCA    297
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU23680___yq    251 AAGAAAAAGGAAGAAGCGTTTGGTACGAGTCGTATGCAGTCCGCGTCGCA    300

BSNT_03523___    298 AAAATCGAAAGACAGCGGCTGTTTCAGGAGAACACGAATGATTGA    342
                     |||.||||.||||||||||||||||||||||||||||||||||||
BSU23680___yq    301 AAAGTCGACAGACAGCGGCTGTTTCAGGAGAACACGAATGATTGA    345


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