Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03520 and BSU23660

See Amino acid alignment / Visit BSNT_03520 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:20
# Commandline: needle
#    -asequence dna-align/BSNT_03520___yqkB.1.22522.seq
#    -bsequence dna-align/BSU23660___yqkB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03520___yqkB-BSU23660___yqkB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03520___yqkB-BSU23660___yqkB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03520___yqkB
# 2: BSU23660___yqkB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 324
# Identity:     324/324 (100.0%)
# Similarity:   324/324 (100.0%)
# Gaps:           0/324 ( 0.0%)
# Score: 1620.0
# 
#
#=======================================

BSNT_03520___      1 ATGAACATACATGTGACAGATGCAGCAAAACAGGCACTGCAGCAGGCGTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23660___yq      1 ATGAACATACATGTGACAGATGCAGCAAAACAGGCACTGCAGCAGGCGTT     50

BSNT_03520___     51 TGACGCCAACCCGGGAAAAAAAGCCCAGCTTCGTTACGATGCAGAAGGAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23660___yq     51 TGACGCCAACCCGGGAAAAAAAGCCCAGCTTCGTTACGATGCAGAAGGAT    100

BSNT_03520___    101 GCGGCTGCGCGGTAAGCGGTGTCCCGACAATCTGGCTGGCAGAAGAATTA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23660___yq    101 GCGGCTGCGCGGTAAGCGGTGTCCCGACAATCTGGCTGGCAGAAGAATTA    150

BSNT_03520___    151 ACGGGACAGTGCGAGCAGCTGGAAACGAACGGCATTCCGCTGTATATCCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23660___yq    151 ACGGGACAGTGCGAGCAGCTGGAAACGAACGGCATTCCGCTGTATATCCA    200

BSNT_03520___    201 ATCGTCGCAAAAAGTGTTTTTTGACGATCAAATGACGATCGATTACAATG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23660___yq    201 ATCGTCGCAAAAAGTGTTTTTTGACGATCAAATGACGATCGATTACAATG    250

BSNT_03520___    251 AAAAAGCCAAAACATTGGCGCTGAAAAGCCCGGCTGAAATGCTCAGCCCC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23660___yq    251 AAAAAGCCAAAACATTGGCGCTGAAAAGCCCGGCTGAAATGCTCAGCCCC    300

BSNT_03520___    301 AGAATGAGCATATTAGTAAAGTAG    324
                     ||||||||||||||||||||||||
BSU23660___yq    301 AGAATGAGCATATTAGTAAAGTAG    324


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