Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03518 and BSU23650

See Amino acid alignment / Visit BSNT_03518 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:20
# Commandline: needle
#    -asequence dna-align/BSNT_03518___yqkC.1.22522.seq
#    -bsequence dna-align/BSU23650___yqkC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03518___yqkC-BSU23650___yqkC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03518___yqkC-BSU23650___yqkC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03518___yqkC
# 2: BSU23650___yqkC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 240
# Identity:     240/240 (100.0%)
# Similarity:   240/240 (100.0%)
# Gaps:           0/240 ( 0.0%)
# Score: 1200.0
# 
#
#=======================================

BSNT_03518___      1 GTGGAACAAAAGCTGAAGGCAATGAAGAACACAGCACAAAATAAAACGTG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23650___yq      1 GTGGAACAAAAGCTGAAGGCAATGAAGAACACAGCACAAAATAAAACGTG     50

BSNT_03518___     51 GGTATCCTTCCTGAATCAAAACCATCCTTATACCTTGCTTCACTGGTCAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23650___yq     51 GGTATCCTTCCTGAATCAAAACCATCCTTATACCTTGCTTCACTGGTCAA    100

BSNT_03518___    101 TCGGAGGAGCAGAGTCCATCAAGAAAGATGTCTGGCTATTGCAGGATGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23650___yq    101 TCGGAGGAGCAGAGTCCATCAAGAAAGATGTCTGGCTATTGCAGGATGAA    150

BSNT_03518___    151 ATGACCTTCGAGACGCAGGAGTTTACAACGATAGATCTTGCGATTGAATG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23650___yq    151 ATGACCTTCGAGACGCAGGAGTTTACAACGATAGATCTTGCGATTGAATG    200

BSNT_03518___    201 GATCAGAGAAAATATGGATGGCATTACCGACGTTCTGTAA    240
                     ||||||||||||||||||||||||||||||||||||||||
BSU23650___yq    201 GATCAGAGAAAATATGGATGGCATTACCGACGTTCTGTAA    240


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