Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03513 and BSU23620

See Amino acid alignment / Visit BSNT_03513 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:20
# Commandline: needle
#    -asequence dna-align/BSNT_03513___yqkF.1.22522.seq
#    -bsequence dna-align/BSU23620___yqkF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03513___yqkF-BSU23620___yqkF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03513___yqkF-BSU23620___yqkF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03513___yqkF
# 2: BSU23620___yqkF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 921
# Identity:     907/921 (98.5%)
# Similarity:   907/921 (98.5%)
# Gaps:           0/921 ( 0.0%)
# Score: 4479.0
# 
#
#=======================================

BSNT_03513___      1 ATGAGAAAGCGCAAATTGGGTACATCTGATTTAGACATTAGTGAAGTCGG     50
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU23620___yq      1 ATGAGAAAGCGCAAATTGGGTACATCTGATTTAGACATTAGCGAAGTCGG     50

BSNT_03513___     51 ACTCGGCTGTATGTCTCTTGGAACTGAAAAAAACAAAGCATTGTCCATTC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23620___yq     51 ACTCGGCTGTATGTCTCTTGGAACTGAAAAAAACAAAGCATTGTCCATTC    100

BSNT_03513___    101 TGGATGAAGCGATCGAGCTCGGCATCAACTATTTGGACACAGCGGATTTG    150
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU23620___yq    101 TGGATGAAGCGATCGAGCTTGGCATCAACTATTTGGACACAGCGGATTTG    150

BSNT_03513___    151 TATGACCGGGGACGCAACGAAGAAATGGTCGGTGATGCGATCCAAAACAG    200
                     |||||||||||||||||.||||||||.|||||||||||||||||||||||
BSU23620___yq    151 TATGACCGGGGACGCAATGAAGAAATTGTCGGTGATGCGATCCAAAACAG    200

BSNT_03513___    201 ACGCCAGGATATTATTCTGGCAACAAAAGCGGGAAACCGTTGGGATGACG    250
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU23620___yq    201 ACGCCATGATATTATTCTGGCAACAAAAGCGGGAAACCGTTGGGATGACG    250

BSNT_03513___    251 GAAGCGAGGGCTGGTATTGGGACCCTTCAAAAGCTTACATAAAAGAGGCG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23620___yq    251 GAAGCGAGGGCTGGTATTGGGACCCTTCAAAAGCTTACATAAAAGAGGCG    300

BSNT_03513___    301 GTAAAAAAGAGCCTTACACGTCTGAAAACAGATTATATCGACCTTTATCA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23620___yq    301 GTAAAAAAGAGCCTTACACGTCTGAAAACAGATTATATCGACCTTTATCA    350

BSNT_03513___    351 GCTTCACGGCGGCACGATAGAGGACAACATTGATGAAACGATCGAAGCGT    400
                     |||.||||||||||||||||||||||||||||||||||||||.|||||||
BSU23620___yq    351 GCTCCACGGCGGCACGATAGAGGACAACATTGATGAAACGATTGAAGCGT    400

BSNT_03513___    401 TTGAGGAATTAAAACAAGAAGGTGTCATCCGCTACTACGGCATTTCTTCC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23620___yq    401 TTGAGGAATTAAAACAAGAAGGTGTCATCCGCTACTACGGCATTTCTTCC    450

BSNT_03513___    451 ATCCGCCCGAATGTGATTAAAGAATATGTGAAAAAATCAAACATCGTCAG    500
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU23620___yq    451 ATCCGCCCGAATGTGATTAAAGAATATGTAAAAAAATCAAACATCGTCAG    500

BSNT_03513___    501 CATTATGATGCAATTCAGCCTGTTTGACAGACGCCCTGAGGAATGGCTCC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23620___yq    501 CATTATGATGCAATTCAGCCTGTTTGACAGACGCCCTGAGGAATGGCTCC    550

BSNT_03513___    551 CGCTTTTAGAGGAACATCAAATCAGCGTAGTCGCCAGAGGTCCTGTTGCC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23620___yq    551 CGCTTTTAGAGGAACATCAAATCAGCGTAGTCGCCAGAGGTCCTGTTGCC    600

BSNT_03513___    601 AAAGGACTCTTAACTGAAAAACCGCTTGATCAAGCTTCAGACAGCATGAA    650
                     |||||.|||||||||||||||||||||||||||||||||||.||.|||||
BSU23620___yq    601 AAAGGGCTCTTAACTGAAAAACCGCTTGATCAAGCTTCAGAAAGTATGAA    650

BSNT_03513___    651 ACAAAACGGGTACTTGTCCTATTCATTCGAGGAACTGACAAATGCACGCA    700
                     |||||||||||||||||||||||||||||||||||||||||||||.||.|
BSU23620___yq    651 ACAAAACGGGTACTTGTCCTATTCATTCGAGGAACTGACAAATGCCCGTA    700

BSNT_03513___    701 AGGCAATGGAGGAAGTGGCTCCCGATCTTTCCATGACAGAAAAGTCGCTG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23620___yq    701 AGGCAATGGAGGAAGTGGCTCCCGATCTTTCCATGACAGAAAAGTCGCTG    750

BSNT_03513___    751 CAGTATCTGCTAGCACAGCCGGCTGTCGCTTCAGTGATTACAGGCGCCAG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23620___yq    751 CAGTATCTGCTAGCACAGCCGGCTGTCGCTTCAGTGATTACAGGCGCCAG    800

BSNT_03513___    801 TAAGATTGAGCAGTTACGGGAAAATATTCAGGCAGCAAATGCACGGCGTT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23620___yq    801 TAAGATTGAGCAGTTACGGGAAAATATTCAGGCAGCAAATGCACGGCGTT    850

BSNT_03513___    851 TAACCGAAGAGGAAATCAAAGCGCTCCAATCTCATACGAAACAAGACATT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23620___yq    851 TAACCGAAGAGGAAATCAAAGCGCTCCAATCTCATACGAAACAAGACATT    900

BSNT_03513___    901 TACAAAACTCATCGCTCATAG    921
                     ||||||.||||||||||||||
BSU23620___yq    901 TACAAAGCTCATCGCTCATAG    921


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