Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03511 and BSU23610

See Amino acid alignment / Visit BSNT_03511 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:20
# Commandline: needle
#    -asequence dna-align/BSNT_03511___nudF.1.22522.seq
#    -bsequence dna-align/BSU23610___nudF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03511___nudF-BSU23610___nudF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03511___nudF-BSU23610___nudF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03511___nudF
# 2: BSU23610___nudF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 558
# Identity:     555/558 (99.5%)
# Similarity:   555/558 (99.5%)
# Gaps:           0/558 ( 0.0%)
# Score: 2763.0
# 
#
#=======================================

BSNT_03511___      1 ATGAAATCATTAGAAGAAAAAACAATTGCCAAAGAACAGATCTTTTCGGG     50
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU23610___nu      1 ATGAAATCATTAGAAGAAAAAACAATTGCCAAAGAACAGATTTTTTCGGG     50

BSNT_03511___     51 TAAAGTCATTGATCTTTATGTCGAGGATGTAGAGCTGCCAAACGGCAAAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23610___nu     51 TAAAGTCATTGATCTTTATGTCGAGGATGTAGAGCTGCCAAACGGCAAAG    100

BSNT_03511___    101 CCAGTAAACGTGAAATTGTGAAACACCCTGGAGCTGTAGCGGTACTAGCC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23610___nu    101 CCAGTAAACGTGAAATTGTGAAACACCCTGGAGCTGTAGCGGTACTAGCC    150

BSNT_03511___    151 GTCACAGATGAAGGGAAAATCATCATGGTCAAACAATTCCGTAAGCCGCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23610___nu    151 GTCACAGATGAAGGGAAAATCATCATGGTCAAACAATTCCGTAAGCCGCT    200

BSNT_03511___    201 TGAGCGGACGATCGTTGAAATTCCGGCCGGTAAGCTTGAAAAAGGTGAGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23610___nu    201 TGAGCGGACGATCGTTGAAATTCCGGCCGGTAAGCTTGAAAAAGGTGAGG    250

BSNT_03511___    251 AGCCGGAGTATACGGCACTTCGGGAACTTGAAGAGGAAACCGGTTATACA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23610___nu    251 AGCCGGAGTATACGGCACTTCGGGAACTTGAAGAGGAAACCGGTTATACA    300

BSNT_03511___    301 GCAAAAAAACTGACAAAAATAACTGCGTTTTATACATCACCCGGATTTGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23610___nu    301 GCAAAAAAACTGACAAAAATAACTGCGTTTTATACATCACCCGGATTTGC    350

BSNT_03511___    351 AGATGAGATCGTTCACGTTTTTCTTGCTGAGGAGCTTTCTGTGCTTGAAG    400
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU23610___nu    351 AGATGAAATCGTTCACGTTTTTCTTGCTGAGGAGCTTTCTGTGCTTGAAG    400

BSNT_03511___    401 AAAAACGGGAGCTTGATGAGGACGAGTTTGTTGAAGTGATGGAGGTGACG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23610___nu    401 AAAAACGGGAGCTTGATGAGGACGAGTTTGTTGAAGTGATGGAGGTGACG    450

BSNT_03511___    451 CTTGAAGATGCGCTAAAGCTGGTTGAATCGCGTGAAGTATATGATGCTAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23610___nu    451 CTTGAAGATGCGCTAAAGCTGGTTGAATCGCGTGAAGTATATGATGCTAA    500

BSNT_03511___    501 AACAGCCTACGCGATTCAGTATCTTCAACTGAAAGAAGCGCTCCAAGCAC    550
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU23610___nu    501 AACAGCCTACGCGATTCAGTATCTTCAGCTGAAAGAAGCGCTCCAAGCAC    550

BSNT_03511___    551 AAAAATGA    558
                     ||||||||
BSU23610___nu    551 AAAAATGA    558


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