Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03487 and BSU23440

See Amino acid alignment / Visit BSNT_03487 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:17
# Commandline: needle
#    -asequence dna-align/BSNT_03487___spoVAA.1.22522.seq
#    -bsequence dna-align/BSU23440___spoVAA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03487___spoVAA-BSU23440___spoVAA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03487___spoVAA-BSU23440___spoVAA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03487___spoVAA
# 2: BSU23440___spoVAA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 624
# Identity:     617/624 (98.9%)
# Similarity:   617/624 (98.9%)
# Gaps:           3/624 ( 0.5%)
# Score: 3069.0
# 
#
#=======================================

BSNT_03487___      1 ATGATGGAACGACGAATATTTATCCGGCTTCGCCACCGGGTGCTGGCACA     50
                        |||||||||||||||||||||||||||||||||||.|||||||||||
BSU23440___sp      1 ---ATGGAACGACGAATATTTATCCGGCTTCGCCACCGAGTGCTGGCACA     47

BSNT_03487___     51 TCCAGGGGATATTATTACCGTTGGAGATGCCGCGCAAATAGAAGGGCAGC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23440___sp     48 TCCAGGGGATATTATTACCGTTGGAGATGCCGCGCAAATAGAAGGGCAGC     97

BSNT_03487___    101 TTCAGCTGAAAAAGAAACTTTCGGCTATGCCGCTTTATCAGGTGAGCGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23440___sp     98 TTCAGCTGAAAAAGAAACTTTCGGCTATGCCGCTTTATCAGGTGAGCGAA    147

BSNT_03487___    151 AAAGATAAAAATATCGTAATTCTGGATATCATACAAGTCCTCAGAGCCAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23440___sp    148 AAAGATAAAAATATCGTAATTCTGGATATCATACAAGTCCTCAGAGCCAT    197

BSNT_03487___    201 TCATTTACAAGATCCGACACTTGATGTTCAAACCGTAGGCGGAGCAGAAA    250
                     ||||||||||||.||||||.||||||||||||||||||||||||||||||
BSU23440___sp    198 TCATTTACAAGACCCGACAATTGATGTTCAAACCGTAGGCGGAGCAGAAA    247

BSNT_03487___    251 CCATTGTTGAAATTCAATATCGAAAGCGAAATTTATCAACGGTTCTATTT    300
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU23440___sp    248 CCATTGTTGAAATTCAGTATCGAAAGCGAAATTTATCAACGGTTCTATTT    297

BSNT_03487___    301 ATCGGTGTCTGGCTGCTTCTGTTTATTGGATCGTGTCTTGCCATCATGAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23440___sp    298 ATCGGTGTCTGGCTGCTTCTGTTTATTGGATCGTGTCTTGCCATCATGAA    347

BSNT_03487___    351 CTTTCATGAGGATGTAAGCATGAGAGATGTTCATATCGCACTATATGAAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23440___sp    348 CTTTCATGAGGATGTAAGCATGAGAGATGTTCATATCGCACTATATGAAA    397

BSNT_03487___    401 TCATAACCGGAGAGAGGAATGACTATCCATATTTGCTTCAAATCCCATAC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23440___sp    398 TCATAACCGGAGAGAGGAATGACTATCCATATTTGCTTCAAATCCCATAC    447

BSNT_03487___    451 AGCATCGGTTTGGGACTGGGGATGATCGTGTTTTTTAACCACATATTTAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23440___sp    448 AGCATCGGTTTGGGACTGGGGATGATCGTGTTTTTTAACCACATATTTAA    497

BSNT_03487___    501 AAAGCGCCTAAATGAAGAGCCCAGCCCGCTGGAGGTTGAGATGTTTAACT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23440___sp    498 AAAGCGCCTAAATGAAGAGCCCAGCCCGCTGGAGGTTGAGATGTTTAACT    547

BSNT_03487___    551 ATCAGCTTGATCTCGATCAATATGTGGCCATGCATGAGAATCAAGAAACC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23440___sp    548 ATCAGCTTGATCTCGATCAATATGTGGCCATGCATGAGAATCAAGAAACC    597

BSNT_03487___    601 ATAAAGGATCTGCATGATCGTTAG    624
                     ||||||||||||||||||||||||
BSU23440___sp    598 ATAAAGGATCTGCATGATCGTTAG    621


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