Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_03479 and BSU23380

See Amino acid alignment / Visit BSNT_03479 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:16
# Commandline: needle
#    -asequence dna-align/BSNT_03479___lysA.1.22522.seq
#    -bsequence dna-align/BSU23380___lysA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03479___lysA-BSU23380___lysA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03479___lysA-BSU23380___lysA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03479___lysA
# 2: BSU23380___lysA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1326
# Identity:    1304/1326 (98.3%)
# Similarity:  1304/1326 (98.3%)
# Gaps:           6/1326 ( 0.5%)
# Score: 6456.0
# 
#
#=======================================

BSNT_03479___      1 ATGACATTGTTCTTACACGGCACAAGCAGACAAAATCAACATGGTCATTT     50
                           ||||||||||||||||||||||||||||||||||||||||||||
BSU23380___ly      1 ------TTGTTCTTACACGGCACAAGCAGACAAAATCAACATGGTCATTT     44

BSNT_03479___     51 AGAAATCGGAGGTGTGGATGCTCTCTATTTAGCGGAGAAATATGGTACAC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23380___ly     45 AGAAATCGGAGGTGTGGATGCTCTCTATTTAGCGGAGAAATATGGTACAC     94

BSNT_03479___    101 CTCTTTACGTATATGATGTGGCTTTAATACGTGAGCGTGCTAAAAGCTTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23380___ly     95 CTCTTTACGTATATGATGTGGCTTTAATACGTGAGCGTGCTAAAAGCTTT    144

BSNT_03479___    151 AAGCAGGCGTTTATTTTCGCAGGGCTGAAAGCACAGGTGGCATATGCGAG    200
                     ||||||||||||||||..||||||||||||||||||||||||||||||||
BSU23380___ly    145 AAGCAGGCGTTTATTTCTGCAGGGCTGAAAGCACAGGTGGCATATGCGAG    194

BSNT_03479___    201 CAAAGCATTCTCATCAGTTGCAATGATTCAGCTCGCTGAGGAAGAGGGAC    250
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU23380___ly    195 CAAAGCATTCTCATCAGTCGCAATGATTCAGCTCGCTGAGGAAGAGGGAC    244

BSNT_03479___    251 TTTCTTTAGATGTTGTATCCGGAGGAGAGCTATATACGGCTGTTGCGGCA    300
                     |||||||||||||.||||||||||||||||||||||||||||||||.|||
BSU23380___ly    245 TTTCTTTAGATGTCGTATCCGGAGGAGAGCTATATACGGCTGTTGCAGCA    294

BSNT_03479___    301 GGCTTTCCGGCAGAACGCATCCACTTTCATGGAAACAATAAGAGCAGGGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23380___ly    295 GGCTTTCCGGCAGAACGCATCCACTTTCATGGAAACAATAAGAGCAGGGA    344

BSNT_03479___    351 AGAACTGCGCATGGCGCTTGAGCACCGCATCGGCTGCATTGTGGTGGATA    400
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU23380___ly    345 AGAACTGCGGATGGCGCTTGAGCACCGCATCGGCTGCATTGTGGTGGATA    394

BSNT_03479___    401 ATTTCTATGAAATTGCGCTTCTTGAAGACCTATGTAAAGAAACGGGTCAC    450
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU23380___ly    395 ATTTCTATGAAATCGCGCTTCTTGAAGACCTATGTAAAGAAACGGGTCAC    444

BSNT_03479___    451 TCCATCGATGTTCTTCTTCGGATCACGCCCGGAGTAGAAGCGCATACGCA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23380___ly    445 TCCATCGATGTTCTTCTTCGGATCACGCCCGGAGTAGAAGCGCATACGCA    494

BSNT_03479___    501 TGACTACATTACAACGGGCCAGGAAGATTCAAAGTTTGGTTTCGACCTTC    550
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU23380___ly    495 TGACTACATTACAACGGGCCAGGAAGATTCAAAGTTTGGTTTCGATCTTC    544

BSNT_03479___    551 ATAACGGACAAACTGAACGGGCCATCGAACAAGTATTACAATCGGAACAC    600
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU23380___ly    545 ATAACGGACAAACTGAACGGGCCATTGAACAAGTATTACAATCGGAACAC    594

BSNT_03479___    601 ATTCAGCTGCTGGGTGTCCATTGCCATATCGGATCGCAAATCTTTGATAC    650
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU23380___ly    595 ATTCAGCTGCTGGGTGTCCATTGCCATATCGGCTCGCAAATCTTTGATAC    644

BSNT_03479___    651 GGCCGGTTTTGTGTTAGCAGCGGAAAAAATCTTCAAAAAACTAGACGAGT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU23380___ly    645 GGCCGGTTTTGTGTTAGCAGCGGAAAAAATCTTCAAAAAACTAGACGAAT    694

BSNT_03479___    701 GGAGAGATTCATATTCATTTGTATCCAAGGTGCTGAATCTTGGAGGAGGT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23380___ly    695 GGAGAGATTCATATTCATTTGTATCCAAGGTGCTGAATCTTGGAGGAGGT    744

BSNT_03479___    751 TTCGGCATTCGTTATACGGAAGATGATGAACCGCTTCATGCCACTGAATA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23380___ly    745 TTCGGCATTCGTTATACGGAAGATGATGAACCGCTTCATGCCACTGAATA    794

BSNT_03479___    801 CGTTGAAAAAATTATCGAAGCTGTGAAAGAAAATGCTTCCCGTTACGGTT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23380___ly    795 CGTTGAAAAAATTATCGAAGCTGTGAAAGAAAATGCTTCCCGTTACGGTT    844

BSNT_03479___    851 TTGACATCCCGGAAATTTGGATCGAACCGGGCCGTTCTCTCGTGGGAGAC    900
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU23380___ly    845 TTGACATTCCGGAAATTTGGATCGAACCGGGCCGTTCTCTCGTGGGAGAC    894

BSNT_03479___    901 GCAGGCACAACTCTTTATACGGTTGGCTCTCAAAAAGAAGTGCCGGGTGT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23380___ly    895 GCAGGCACAACTCTTTATACGGTTGGCTCTCAAAAAGAAGTGCCGGGTGT    944

BSNT_03479___    951 CCGCCAGTATGTGGCAGTAGACGGAGGCATGAACGACAATATTCGTCCTG   1000
                     ||||||.||||||||.||||||||||||||||||||||||||||||||||
BSU23380___ly    945 CCGCCAATATGTGGCTGTAGACGGAGGCATGAACGACAATATTCGTCCTG    994

BSNT_03479___   1001 CGCTTTACCAAGCTAAATATGAAGCTGCGGCAGCCAACAGGATCGGAGAA   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23380___ly    995 CGCTTTACCAAGCTAAATATGAAGCTGCGGCAGCCAACAGGATCGGAGAA   1044

BSNT_03479___   1051 GCGCATGACAAAACGGTATCAATTGCCGGAAAGTGCTGTGAAAGCGGAGA   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23380___ly   1045 GCGCATGACAAAACGGTATCAATTGCCGGAAAGTGCTGTGAAAGCGGAGA   1094

BSNT_03479___   1101 TATGCTGATTTGGGATATTGACCTGCCGGAAGTAAAAGAAGGCGATCTTC   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23380___ly   1095 TATGCTGATTTGGGATATTGACCTGCCGGAAGTAAAAGAAGGCGATCTTC   1144

BSNT_03479___   1151 TTGCCGTTTTTTGTACAGGCGCTTATGGATACAGCATGGCCAACAATTAT   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23380___ly   1145 TTGCCGTTTTTTGTACAGGCGCTTATGGATACAGCATGGCCAACAATTAT   1194

BSNT_03479___   1201 AACCGTATTCCGAGACCCGCCGTTGTATTTGTCGAAAACGGTGAGGCTCA   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23380___ly   1195 AACCGTATTCCGAGACCCGCCGTTGTATTTGTCGAAAACGGTGAGGCTCA   1244

BSNT_03479___   1251 TTTAGTCGTGAAGCGAGAAACATACGAGGATATTGTAAAACTTGATCTGC   1300
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU23380___ly   1245 TTTAGTCGTGAAGCGAGAAACATACGAAGATATTGTAAAACTTGATCTGC   1294

BSNT_03479___   1301 CATTTAAAACAGGTGTAAAGCAATAA   1326
                     ||||||||||.|||||||||||||||
BSU23380___ly   1295 CATTTAAAACGGGTGTAAAGCAATAA   1320


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.