Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03474 and BSU23360
See
Amino acid alignment /
Visit
BSNT_03474 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:15
# Commandline: needle
# -asequence dna-align/BSNT_03474___ppiB.1.22522.seq
# -bsequence dna-align/BSU23360___ppiB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03474___ppiB-BSU23360___ppiB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03474___ppiB-BSU23360___ppiB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03474___ppiB
# 2: BSU23360___ppiB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 433
# Identity: 381/433 (88.0%)
# Similarity: 381/433 (88.0%)
# Gaps: 2/433 ( 0.5%)
# Score: 1685.0
#
#
#=======================================
BSNT_03474___ 1 ATGAAAACAGGTTACATTTTAATGGAAAATGGCAACAAACTTGAATTTGA 50
.||||||||||||||.|||||.|.|||.|.||.||||||.||||||||||
BSU23360___pp 1 TTGAAAACAGGTTACTTTTTATTAGAAGACGGGAACAAAATTGAATTTGA 50
BSNT_03474___ 51 ACTTTACGATGAAGCAGCTCCGGGTACAGTAGCTAACTTTGAAAAGCTTG 100
||||||...||||||.||.||.||.||.||.||.||||||||||||||||
BSU23360___pp 51 ACTTTATCCTGAAGCTGCACCTGGAACTGTTGCAAACTTTGAAAAGCTTG 100
BSNT_03474___ 101 CGAATGAAGGCTTTTATGATGGTGTAACTTTCCACCGAGTAATTCCAGGT 150
||||.||||||||||||||.||..|.||.|||||||||||.||.||.||.
BSU23360___pp 101 CGAACGAAGGCTTTTATGACGGGCTTACATTCCACCGAGTGATCCCTGGC 150
BSNT_03474___ 151 TTCGTAAGCCAAGGGGGA-GATCCTACTGGAACAGGGATGGGTGGCCCAG 199
|||||.||||||||.||| |..|..|| |||||.||.|..||.||.||.|
BSU23360___pp 151 TTCGTCAGCCAAGGCGGATGCCCGCAC-GGAACTGGTACAGGCGGTCCGG 199
BSNT_03474___ 200 GTTACACAATCAAATGTGAAACAGAAGGAAATCCGCATACACATGAAGCG 249
|.||||||||||||||||||||||||||.||.||||||||||||||.|||
BSU23360___pp 200 GATACACAATCAAATGTGAAACAGAAGGCAACCCGCATACACATGAGGCG 249
BSNT_03474___ 250 GGCTCTCTTTCTATGGCACATGCCGGAAAAGACACTGGCGGCAGCCAATT 299
|||.|.||||||||||||||||||||||||||||||||||||||||||||
BSU23360___pp 250 GGCGCACTTTCTATGGCACATGCCGGAAAAGACACTGGCGGCAGCCAATT 299
BSNT_03474___ 300 TTTCATCGTTCATGAGCCACAGCCTCATTTGAACGGTGTTCACACTGTAT 349
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23360___pp 300 TTTCATCGTTCATGAGCCACAGCCTCATTTGAACGGTGTTCACACTGTAT 349
BSNT_03474___ 350 TCGGTAAAGTAACAAGCGGATTAGAATTCGCGAAAAACATGTCTAACGGC 399
|.||||||||||||||||||||||||||||||||||||||||||||.|||
BSU23360___pp 350 TTGGTAAAGTAACAAGCGGATTAGAATTCGCGAAAAACATGTCTAATGGC 399
BSNT_03474___ 400 GATGTCATGAAAGAAGTTCGCGTAGAAGGCTAA 432
||||||||||||||||||||.||||||||||||
BSU23360___pp 400 GATGTCATGAAAGAAGTTCGTGTAGAAGGCTAA 432
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.