Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_03474 and BSU23360

See Amino acid alignment / Visit BSNT_03474 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:15
# Commandline: needle
#    -asequence dna-align/BSNT_03474___ppiB.1.22522.seq
#    -bsequence dna-align/BSU23360___ppiB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03474___ppiB-BSU23360___ppiB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03474___ppiB-BSU23360___ppiB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03474___ppiB
# 2: BSU23360___ppiB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 433
# Identity:     381/433 (88.0%)
# Similarity:   381/433 (88.0%)
# Gaps:           2/433 ( 0.5%)
# Score: 1685.0
# 
#
#=======================================

BSNT_03474___      1 ATGAAAACAGGTTACATTTTAATGGAAAATGGCAACAAACTTGAATTTGA     50
                     .||||||||||||||.|||||.|.|||.|.||.||||||.||||||||||
BSU23360___pp      1 TTGAAAACAGGTTACTTTTTATTAGAAGACGGGAACAAAATTGAATTTGA     50

BSNT_03474___     51 ACTTTACGATGAAGCAGCTCCGGGTACAGTAGCTAACTTTGAAAAGCTTG    100
                     ||||||...||||||.||.||.||.||.||.||.||||||||||||||||
BSU23360___pp     51 ACTTTATCCTGAAGCTGCACCTGGAACTGTTGCAAACTTTGAAAAGCTTG    100

BSNT_03474___    101 CGAATGAAGGCTTTTATGATGGTGTAACTTTCCACCGAGTAATTCCAGGT    150
                     ||||.||||||||||||||.||..|.||.|||||||||||.||.||.||.
BSU23360___pp    101 CGAACGAAGGCTTTTATGACGGGCTTACATTCCACCGAGTGATCCCTGGC    150

BSNT_03474___    151 TTCGTAAGCCAAGGGGGA-GATCCTACTGGAACAGGGATGGGTGGCCCAG    199
                     |||||.||||||||.||| |..|..|| |||||.||.|..||.||.||.|
BSU23360___pp    151 TTCGTCAGCCAAGGCGGATGCCCGCAC-GGAACTGGTACAGGCGGTCCGG    199

BSNT_03474___    200 GTTACACAATCAAATGTGAAACAGAAGGAAATCCGCATACACATGAAGCG    249
                     |.||||||||||||||||||||||||||.||.||||||||||||||.|||
BSU23360___pp    200 GATACACAATCAAATGTGAAACAGAAGGCAACCCGCATACACATGAGGCG    249

BSNT_03474___    250 GGCTCTCTTTCTATGGCACATGCCGGAAAAGACACTGGCGGCAGCCAATT    299
                     |||.|.||||||||||||||||||||||||||||||||||||||||||||
BSU23360___pp    250 GGCGCACTTTCTATGGCACATGCCGGAAAAGACACTGGCGGCAGCCAATT    299

BSNT_03474___    300 TTTCATCGTTCATGAGCCACAGCCTCATTTGAACGGTGTTCACACTGTAT    349
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23360___pp    300 TTTCATCGTTCATGAGCCACAGCCTCATTTGAACGGTGTTCACACTGTAT    349

BSNT_03474___    350 TCGGTAAAGTAACAAGCGGATTAGAATTCGCGAAAAACATGTCTAACGGC    399
                     |.||||||||||||||||||||||||||||||||||||||||||||.|||
BSU23360___pp    350 TTGGTAAAGTAACAAGCGGATTAGAATTCGCGAAAAACATGTCTAATGGC    399

BSNT_03474___    400 GATGTCATGAAAGAAGTTCGCGTAGAAGGCTAA    432
                     ||||||||||||||||||||.||||||||||||
BSU23360___pp    400 GATGTCATGAAAGAAGTTCGTGTAGAAGGCTAA    432


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.