Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03466 and BSU23300

See Amino acid alignment / Visit BSNT_03466 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:15
# Commandline: needle
#    -asequence dna-align/BSNT_03466___ypuD.1.22522.seq
#    -bsequence dna-align/BSU23300___ypuD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03466___ypuD-BSU23300___ypuD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03466___ypuD-BSU23300___ypuD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03466___ypuD
# 2: BSU23300___ypuD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity:     342/345 (99.1%)
# Similarity:   342/345 (99.1%)
# Gaps:           0/345 ( 0.0%)
# Score: 1698.0
# 
#
#=======================================

BSNT_03466___      1 ATGGGAAGAATAAAAACCAAGATTACCATTCTGTTAGTGCTTTTGCTTTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23300___yp      1 ATGGGAAGAATAAAAACCAAGATTACCATTCTGTTAGTGCTTTTGCTTTT     50

BSNT_03466___     51 ACTTGCAGGCGGTTATATGTACATAAATGATGTTGAGCTGAAGGATGTTC    100
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU23300___yp     51 ACTTGCAGGCGGTTATATGTACATAAATGATATTGAGCTGAAGGATGTTC    100

BSNT_03466___    101 CGACAGCAATTGGACAAACCTTGTCCTCGGAAGAAGAGGAATACACCATC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23300___yp    101 CGACAGCAATTGGACAAACCTTGTCCTCGGAAGAAGAGGAATACACCATC    150

BSNT_03466___    151 CAGGAATATAAAGTGACGAAAATTGACGGCTCAGAGTATCATGGAGTAGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23300___yp    151 CAGGAATATAAAGTGACGAAAATTGACGGCTCAGAGTATCATGGAGTAGC    200

BSNT_03466___    201 AGAAAACGGAACGAAAATCATCTTTAACGGAAAAAAATTAAATCAGGATT    250
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU23300___yp    201 AGAAAACGGAACGAAAATCATCTTCAACGGAAAAAAATTAAATCAGGATT    250

BSNT_03466___    251 TATCTGATATAAAAGAAGGTGACAAGATTAAGGCATACTTCAGCAAATCA    300
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU23300___yp    251 TATCTGATATAAAAGAAGGTGACAAGATTAAGGCTTACTTCAGCAAATCA    300

BSNT_03466___    301 AAGCGGATCGACGGATTAATCAAGGTTGCAAAAGTGAATGATTAA    345
                     |||||||||||||||||||||||||||||||||||||||||||||
BSU23300___yp    301 AAGCGGATCGACGGATTAATCAAGGTTGCAAAAGTGAATGATTAA    345


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