Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03457 and BSU23230

See Amino acid alignment / Visit BSNT_03457 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:14
# Commandline: needle
#    -asequence dna-align/BSNT_03457___ypuF.1.22522.seq
#    -bsequence dna-align/BSU23230___ypuF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03457___ypuF-BSU23230___ypuF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03457___ypuF-BSU23230___ypuF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03457___ypuF
# 2: BSU23230___ypuF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 525
# Identity:     510/525 (97.1%)
# Similarity:   510/525 (97.1%)
# Gaps:           0/525 ( 0.0%)
# Score: 2490.0
# 
#
#=======================================

BSNT_03457___      1 TTGTATCCGAAAGCTTATATAGATTATCTCGTTGAGTTTCACGCGACACG     50
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU23230___yp      1 TTGTATCCGAAAGCTTATATAGATTATCTCGTTGAGTTTCATGCGACACG     50

BSNT_03457___     51 GGATTATTTTGAATGCCATGAAATATTAGAAGAATATTGGAAGGAAGATC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23230___yp     51 GGATTATTTTGAATGCCATGAAATATTAGAAGAATATTGGAAGGAAGATC    100

BSNT_03457___    101 CGCCAAAGAAACGAAAACGCTATTGGGTCGGCTTTATTCAGCTTGCAGTT    150
                     ||||||||||||||||||||||||||||.||||||||||||||||||||.
BSU23230___yp    101 CGCCAAAGAAACGAAAACGCTATTGGGTGGGCTTTATTCAGCTTGCAGTG    150

BSNT_03457___    151 GCTTTATATCATCACAGAAGGCAGAATACAGCCGGGGCAAAAAGACTGAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23230___yp    151 GCTTTATATCATCACAGAAGGCAGAATACAGCCGGGGCAAAAAGACTGAT    200

BSNT_03457___    201 GGCAAACAGCATCCGAATTCTCAAAGCAGAACACCGGGCAGTCGAAGACT    250
                     |||.|||||||||||.|||||..|||||||||||||||||||||||||||
BSU23230___yp    201 GGCGAACAGCATCCGGATTCTTCAAGCAGAACACCGGGCAGTCGAAGACT    250

BSNT_03457___    251 TAGGGCTTGATCATGGCCGTTTGCTCGAGCTTATGCAATCGGTTTACGAA    300
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU23230___yp    251 TAGGGCTTGATCATGGCCGTTTGCTCGAACTTATGCAATCGGTTTACGAA    300

BSNT_03457___    301 CAAATCGAAACGGGCTCTGCCTATAAAAGCATTATGCTGCCAATCAAAGA    350
                     |||||||||||.|.|||||||||||||||||||||.||||||||||||||
BSU23230___yp    301 CAAATCGAAACCGTCTCTGCCTATAAAAGCATTATACTGCCAATCAAAGA    350

BSNT_03457___    351 TGAGAAACTGGAGGAAGCATGCAGGATCGAATGCAGGAAAAAAAAGTATA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23230___yp    351 TGAGAAACTGGAGGAAGCATGCAGGATCGAATGCAGGAAAAAAAAGTATA    400

BSNT_03457___    401 CATGGGGGCAGTCCAGTGCACTCAGGAACATATTTCTGATCGACAAACAC    450
                     |||||||||||.|||||||||||||.|||||||||||.||||||||||||
BSU23230___yp    401 CATGGGGGCAGCCCAGTGCACTCAGCAACATATTTCTTATCGACAAACAC    450

BSNT_03457___    451 CGTTTGCGGGATCGGACTGACGTCATCCGTGAACGTGAAAAAGAAATAGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23230___yp    451 CGTTTGCGGGATCGGACTGACGTCATCCGTGAACGTGAAAAAGAAATAGA    500

BSNT_03457___    501 ACGCAGAAAAAAAAGCAGAGGCTGA    525
                     ||||||||||||||||||||.||||
BSU23230___yp    501 ACGCAGAAAAAAAAGCAGAGACTGA    525


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