Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03453 and BSU23200

See Amino acid alignment / Visit BSNT_03453 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:14
# Commandline: needle
#    -asequence dna-align/BSNT_03453___ypuI.1.22522.seq
#    -bsequence dna-align/BSU23200___ypuI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03453___ypuI-BSU23200___ypuI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03453___ypuI-BSU23200___ypuI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03453___ypuI
# 2: BSU23200___ypuI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 540
# Identity:     537/540 (99.4%)
# Similarity:   537/540 (99.4%)
# Gaps:           0/540 ( 0.0%)
# Score: 2673.0
# 
#
#=======================================

BSNT_03453___      1 ATGAAAGAAGCAAAATGTGAGAGACAAAGACATGAGGGGAAGATACCAAA     50
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU23200___yp      1 ATGAAAGAAGCAAAATGTGAGAGACAAATACATGAGGGGAAGATACCAAA     50

BSNT_03453___     51 CGAAATGGGACATTCGATTGTGCGAGCGCAGACTCAAAAAACAGGCGAAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23200___yp     51 CGAAATGGGACATTCGATTGTGCGAGCGCAGACTCAAAAAACAGGCGAAT    100

BSNT_03453___    101 TCTTATCAATGGTTGTCAATACCGTGAACGATTACCTAAATCAAACGACG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23200___yp    101 TCTTATCAATGGTTGTCAATACCGTGAACGATTACCTAAATCAAACGACG    150

BSNT_03453___    151 CTTGAGTCCTTACAGGCTGAATTGCCTATTGAAAAAGGATACTGCTGTGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23200___yp    151 CTTGAGTCCTTACAGGCTGAATTGCCTATTGAAAAAGGATACTGCTGTGA    200

BSNT_03453___    201 TGTGCTGAGCACTCTGAGAAGAATGGCAGTATTTTGTGAAGGAGGCGCAG    250
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU23200___yp    201 TGTGCTTAGCACTCTGAGAAGAATGGCAGTATTTTGTGAAGGAGGCGCAG    250

BSNT_03453___    251 AAGCGTGCCGCCGTCTCCTGATGCAGGAGCCTTTTCAGGAAGCCAGAGCG    300
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU23200___yp    251 AAGCGTGCCGTCGTCTCCTGATGCAGGAGCCTTTTCAGGAAGCCAGAGCG    300

BSNT_03453___    301 GAAAAAACACTTTATAATGTGTATCACCAATGCATTGAAGAGTTCTTTAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23200___yp    301 GAAAAAACACTTTATAATGTGTATCACCAATGCATTGAAGAGTTCTTTAT    350

BSNT_03453___    351 GCCGAAAAAAGACACGTGGTGTGAAAATAGCCGGGCGTCTTATACCGGGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23200___yp    351 GCCGAAAAAAGACACGTGGTGTGAAAATAGCCGGGCGTCTTATACCGGGG    400

BSNT_03453___    401 TCAGCGCAATTGAGTTTTATCATGCTGTTCCTGCGTCGCTTGAGCAATTA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23200___yp    401 TCAGCGCAATTGAGTTTTATCATGCTGTTCCTGCGTCGCTTGAGCAATTA    450

BSNT_03453___    451 TTATTGCCGTTGAGCGCGGCCTTTCTGAAGATGAGGGAAGAGCTGGCTCA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23200___yp    451 TTATTGCCGTTGAGCGCGGCCTTTCTGAAGATGAGGGAAGAGCTGGCTCA    500

BSNT_03453___    501 TTACGAAGCGTCCGGATCAAGCATGGCGCCAATCAGATAA    540
                     ||||||||||||||||||||||||||||||||||||||||
BSU23200___yp    501 TTACGAAGCGTCCGGATCAAGCATGGCGCCAATCAGATAA    540


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