Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03437 and BSU23100

See Amino acid alignment / Visit BSNT_03437 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:12
# Commandline: needle
#    -asequence dna-align/BSNT_03437___sigX.1.22522.seq
#    -bsequence dna-align/BSU23100___sigX.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03437___sigX-BSU23100___sigX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03437___sigX-BSU23100___sigX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03437___sigX
# 2: BSU23100___sigX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 585
# Identity:     582/585 (99.5%)
# Similarity:   582/585 (99.5%)
# Gaps:           0/585 ( 0.0%)
# Score: 2898.0
# 
#
#=======================================

BSNT_03437___      1 ATGGAAGAAACCTTTCAATTATTATATGATACATATCATCAAGATTTGTA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23100___si      1 ATGGAAGAAACCTTTCAATTATTATATGATACATATCATCAAGATTTGTA     50

BSNT_03437___     51 CCAATTTTTATTTTATATGGTAAAGGATAAAAACCAGACAGAAGACCTTC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23100___si     51 CCAATTTTTATTTTATATGGTAAAGGATAAAAACCAGACAGAAGACCTTC    100

BSNT_03437___    101 TTCAAGAGGTTTATATCCGGGTATTAAATTCTTATCATACGTTTGAAGGA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23100___si    101 TTCAAGAGGTTTATATCCGGGTATTAAATTCTTATCATACGTTTGAAGGA    150

BSNT_03437___    151 AGAAGCAGTGAAAAAACATGGCTATTGTCTATCGCACGCCATGTTGCGAT    200
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU23100___si    151 AGAAGCAGTGAAAAAACATGGCTTTTGTCTATCGCACGCCATGTTGCGAT    200

BSNT_03437___    201 AGACTGGTTCCGTAAACAGCAAACAATCAGACAGCGTATACTCGGTACAT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23100___si    201 AGACTGGTTCCGTAAACAGCAAACAATCAGACAGCGTATACTCGGTACAT    250

BSNT_03437___    251 TTGACTGGGATACACAGGATGTCAGGGATCAGCAATTGCTACCGGACGAA    300
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU23100___si    251 TTGACTGGGATACACAGGATGTCAGGGATCAGCAATTGCTGCCGGACGAA    300

BSNT_03437___    301 CTTGCCGTTCAACATGAAAATGTCCGGGAAATTTATGCTGCGCTTGATCA    350
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU23100___si    301 CTTGCGGTTCAACATGAAAATGTCCGGGAAATTTATGCTGCGCTTGATCA    350

BSNT_03437___    351 ATGTACAATCGATCAAAGAGCTGTGATTATCTTGCGGTTTATTCAGGGAT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23100___si    351 ATGTACAATCGATCAAAGAGCTGTGATTATCTTGCGGTTTATTCAGGGAT    400

BSNT_03437___    401 ATTCAATACAGGAAACAGCCAAGGCTCTGCGCTTCTCGGAAAGCAAAGTA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23100___si    401 ATTCAATACAGGAAACAGCCAAGGCTCTGCGCTTCTCGGAAAGCAAAGTA    450

BSNT_03437___    451 AAAACGACCCAACACAGAGGGCTCAAAGTACTTCGGAAACATATGGAGCT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23100___si    451 AAAACGACCCAACACAGAGGGCTCAAAGTACTTCGGAAACATATGGAGCT    500

BSNT_03437___    501 TTTGAGGGAGGAGCTAATGGATGATGAAGTCAGAATGGAACGAAGAACAG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23100___si    501 TTTGAGGGAGGAGCTAATGGATGATGAAGTCAGAATGGAACGAAGAACAG    550

BSNT_03437___    551 ATAAAGGAGTTGTTAAGTCAACTTCCGGCAGTTAA    585
                     |||||||||||||||||||||||||||||||||||
BSU23100___si    551 ATAAAGGAGTTGTTAAGTCAACTTCCGGCAGTTAA    585


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