Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03436 and BSU23090
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:12
# Commandline: needle
# -asequence dna-align/BSNT_03436.1.22522.seq
# -bsequence dna-align/BSU23090___rsiX.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03436-BSU23090___rsiX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03436-BSU23090___rsiX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03436
# 2: BSU23090___rsiX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1112
# Identity: 960/1112 (86.3%)
# Similarity: 960/1112 (86.3%)
# Gaps: 118/1112 (10.6%)
# Score: 4619.5
#
#
#=======================================
BSNT_03436 0 -------------------------------------------------- 0
BSU23090___rs 1 ATGATGAAGTCAGAATGGAACGAAGAACAGATAAAGGAGTTGTTAAGTCA 50
BSNT_03436 0 -------------------------------------------------- 0
BSU23090___rs 51 ACTTCCGGCAGTTAAAGACCATCGTTCGCCTCAGGATATTTACAAGCGGC 100
BSNT_03436 1 -----ATGGCAAAGCGTAAAAATAAGCCCGCTGTCAGGTGGATTGGCCCC 45
|||||||||||||||||||||||||||||||||||||||||||||
BSU23090___rs 101 TGACGATGGCAAAGCGTAAAAATAAGCCCGCTGTCAGGTGGATTGGCCCC 150
BSNT_03436 46 GCGTGTGCCGCTGCAATTGCGGTTTATATCGCCTTCATTATTTCTCCTCA 95
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23090___rs 151 GCGTGTGCCGCTGCAATTGCGGTTTATATCGCCTTCATTATTTCTCCTCA 200
BSNT_03436 96 TTTCTTTGATCAGGCACAGCCTCAACAAAAAGAAGCGTCCCAAGAGAACG 145
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23090___rs 201 TTTCTTTGATCAGGCACAGCCTCAACAAAAAGAAGCGTCCCAAGAGAACG 250
BSNT_03436 146 CAGTAACGAAAACTGAGACAGAAGACAGCCCAAAAGCTGCATCGTCCTTG 195
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23090___rs 251 CAGTAACGAAAACTGAGACAGAAGACAGCCCAAAAGCTGCATCGTCCTTG 300
BSNT_03436 196 GATCATACATCGTTTGTTGTACCTGAAAAGGAACAAGACAATTACATCAC 245
|||||.|||||||||||.||.|||||||||||||||||||||||||||||
BSU23090___rs 301 GATCAGACATCGTTTGTCGTTCCTGAAAAGGAACAAGACAATTACATCAC 350
BSNT_03436 246 TGTAGCAGTTGCTGATGCCGATACATCCGCAATCATACCCGTCAGCATCC 295
||||||.||||||||||||||||||||.||||||||||||||||||||.|
BSU23090___rs 351 TGTAGCGGTTGCTGATGCCGATACATCTGCAATCATACCCGTCAGCATTC 400
BSNT_03436 296 AAAAAACAAATGCAGACCAAACGATCCAGGATATGCTGTTTGAAAGTAGT 345
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23090___rs 401 AAAAAACAAATGCAGACCAAACGATCCAGGATATGCTGTTTGAAAGTAGT 450
BSNT_03436 346 GAATTGGGCATCCTTGATCATGCCATTACAATTCCAACCTTCATAGATGA 395
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23090___rs 451 GAATTGGGCATCCTTGATCATGCCATTACAATTCCAACCTTCATAGATGA 500
BSNT_03436 396 AGTAGAAATAAAGGAAAAACCAAAGCAGAAGGAATTAAGTATACGAGTCC 445
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23090___rs 501 AGTAGAAATAAAGGAAAAACCAAAGCAGAAGGAATTAAGTATACGAGTCC 550
BSNT_03436 446 ATCAGCCAGCTACGGCATTTTCTGTAAAAGATGATACACTGTTAAAAAAA 495
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU23090___rs 551 ATCAGCCAGCTACGGCATTTTCTATAAAAGATGATACACTGTTAAAAAAA 600
BSNT_03436 496 TTGCTTAAAGAATCCTTAAAATGGAGTCCTTATGAAAAAGTCAAATTTTT 545
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23090___rs 601 TTGCTTAAAGAATCCTTAAAATGGAGTCCTTATGAAAAAGTCAAATTTTT 650
BSNT_03436 546 ATCGGATCAAAATGAGACTGGGGTTCGGATTGGCTCATATGGCACTTTTA 595
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23090___rs 651 ATCGGATCAAAATGAGACTGGGGTTCGGATTGGCTCATATGGCACTTTTA 700
BSNT_03436 596 CGGAAATTTCGATTCCCAAACAGTCAAAAAGAGCTTACTACTTGTATAAA 645
|||||||||||||||||||||||||||||.||.|.|||||||||||..||
BSU23090___rs 701 CGGAAATTTCGATTCCCAAACAGTCAAAACGATCCTACTACTTGTACCAA 750
BSNT_03436 646 AATAAACAAGGGA----ACTTTCTCATTCCGTCAGAAAAAACA----TTT 687
||||||||| ||| ||||||||.||||||| |||.|| |||
BSU23090___rs 751 AATAAACAA-GGACAAGACTTTCTCGTTCCGTC----AAATCATTCTTTT 795
BSNT_03436 688 GATACGGTAAAAGAAGCGATTAATGAAATGGAATCGAGCAGCCAAGAAGA 737
|||||.|||||||||||||||||.||||||||||||||||||||||||||
BSU23090___rs 796 GATACAGTAAAAGAAGCGATTAAGGAAATGGAATCGAGCAGCCAAGAAGA 845
BSNT_03436 738 TACAACACCGCTTATTCAAGCGGGTACTGTCCAATCTGTAACGAAGAAAC 787
|||.|||||.|||||||||||||||.||||||||||||||||||||||||
BSU23090___rs 846 TACGACACCTCTTATTCAAGCGGGTGCTGTCCAATCTGTAACGAAGAAAC 895
BSNT_03436 788 AGAAGCACTTATATATCCGTTTCTCAAAGGACTCAGAAGTTGAGGATTCT 837
||||.||||||||||||||.||.||||||||.|||||||||||.||||||
BSU23090___rs 896 AGAAACACTTATATATCCGCTTTTCAAAGGAGTCAGAAGTTGATGATTCT 945
BSNT_03436 838 ATTGCCGGTATTTTAATGATTGAGGGACTTCTTTTAACCGCAAAAGAGTT 887
|||||||||||||||||||||||||||||.|||||.||.|||||||||||
BSU23090___rs 946 ATTGCCGGTATTTTAATGATTGAGGGACTACTTTTGACTGCAAAAGAGTT 995
BSNT_03436 888 TGGCTTCACAGAAGTGACCTTTACCGAAACCAGAACAAACAAAATCGGCA 937
||||||||||||||||||||||||.|||||||||||.||.||||||||||
BSU23090___rs 996 TGGCTTCACAGAAGTGACCTTTACGGAAACCAGAACGAAAAAAATCGGCA 1045
BSNT_03436 938 AATATGACGTATCAGATGCAATTCCGGTACCGGCTGCTCCAAATCCGATT 987
||||||||.|||||||||||||||||||.||.||||||||||||||||||
BSU23090___rs 1046 AATATGACATATCAGATGCAATTCCGGTGCCAGCTGCTCCAAATCCGATT 1095
BSNT_03436 988 TTCTTAAACTAA 999
|.||||||||||
BSU23090___rs 1096 TCCTTAAACTAA 1107
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