Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03427 and BSU23030
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:11
# Commandline: needle
# -asequence dna-align/BSNT_03427___ypbB.1.22522.seq
# -bsequence dna-align/BSU23030___ypbB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03427___ypbB-BSU23030___ypbB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03427___ypbB-BSU23030___ypbB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03427___ypbB
# 2: BSU23030___ypbB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1059
# Identity: 1044/1059 (98.6%)
# Similarity: 1044/1059 (98.6%)
# Gaps: 0/1059 ( 0.0%)
# Score: 5160.0
#
#
#=======================================
BSNT_03427___ 1 TTGTCATTAAATTACTTCGATATTATGGTTCTCGATTGCCTTTGCAAAAT 50
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU23030___yp 1 TTGTCATTAAATTACTTCGATATTATGGTTCTCGATTGTCTTTGCAAAAT 50
BSNT_03427___ 51 AAACGGGGAACGGTCGGGAAGCGCTGTTTTTCACCTATTCAAAGGCAAGA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23030___yp 51 AAACGGGGAACGGTCGGGAAGCGCTGTTTTTCACCTATTCAAAGGCAAGA 100
BSNT_03427___ 101 GATCGTCACAAACCATTCAAGATGCCGGCTTATTTCAGACTGCAAAATAC 150
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU23030___yp 101 GATCGTCACAGACCATTCAAGATGCCGGCTTATTTCAGACTGCAAAATAC 150
BSNT_03427___ 151 TTTGGAATGGCGGCGCAATGTTCGAGAAGCGATGTTTCTGAGTCGCTTGA 200
||||||||||||||..|||||||||||||||||.||||||.|||||||||
BSU23030___yp 151 TTTGGAATGGCGGCAAAATGTTCGAGAAGCGATATTTCTGCGTCGCTTGA 200
BSNT_03427___ 201 CAAGCTTGAAAAGCATTCATATCTCTCGCCAATGTCTGAAACAGATACAT 250
|||||||||||||||||||||||||.||||||||||||||.|||||||||
BSU23030___yp 201 CAAGCTTGAAAAGCATTCATATCTCGCGCCAATGTCTGAATCAGATACAT 250
BSNT_03427___ 251 ACAAAGTGACAGCCAGCGGCGCAGCAGTTTTAAGGCATGCCCTTAGCGAG 300
|||||||||||||||||||||||||||||||.||.|||||||||||||||
BSU23030___yp 251 ACAAAGTGACAGCCAGCGGCGCAGCAGTTTTGAGACATGCCCTTAGCGAG 300
BSNT_03427___ 301 CGGCCTTGGCCCGTTCATTGTCACGGCGCTCATTATCAGCAGGCTGCCGG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23030___yp 301 CGGCCTTGGCCCGTTCATTGTCACGGCGCTCATTATCAGCAGGCTGCCGG 350
BSNT_03427___ 351 TGTGCTTTGGAAAAGGCTTTCGCTGCTTGTGCAGGTCCTATCCCATAAAC 400
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU23030___yp 351 CGTGCTTTGGAAAAGGCTTTCGCTGCTTGTGCAGGTCCTATCCCATAAAC 400
BSNT_03427___ 401 AGCAAGGGAGCAGGCAGTATATCCCTGTCACAAAGGATCATAAGACACTT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23030___yp 401 AGCAAGGGAGCAGGCAGTATATCCCTGTCACAAAGGATCATAAGACACTT 450
BSNT_03427___ 451 CACTGGGTAAAGAAATACCTGTCCCGGCATACGGATCATATAGAGATGGC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23030___yp 451 CACTGGGTAAAGAAATACCTGTCCCGGCATACGGATCATATAGAGATGGC 500
BSNT_03427___ 501 AAAAAGCCTTTTTGCCATGCTTGAGGCGCATTTGAAAAAGATTGAAAACA 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23030___yp 501 AAAAAGCCTTTTTGCCATGCTTGAGGCGCATTTGAAAAAGATTGAAAACA 550
BSNT_03427___ 551 AAGCAGCGCAAATTTTTGTCTACTCCTTAACCTCGCACCATCGGATCGGT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23030___yp 551 AAGCAGCGCAAATTTTTGTCTACTCCTTAACCTCGCACCATCGGATCGGT 600
BSNT_03427___ 601 TATACTAGCAGGCAGCTTGCTGATACGCTGAAAGAAGACGAATGGTATGT 650
|||||.||||||||||||||||||||||||||||||||||||||||||||
BSU23030___yp 601 TATACGAGCAGGCAGCTTGCTGATACGCTGAAAGAAGACGAATGGTATGT 650
BSNT_03427___ 651 CTATATCATGTTTTGGGCTTCGGTACATTATTTTATTCATTCTCTTCCGG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23030___yp 651 CTATATCATGTTTTGGGCTTCGGTACATTATTTTATTCATTCTCTTCCGG 700
BSNT_03427___ 701 AGTGTGAAGATGCTTTGTTAAAGGATCTCCTTTCTGATGTGCACTTAGAT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23030___yp 701 AGTGTGAAGATGCTTTGTTAAAGGATCTCCTTTCTGATGTGCACTTAGAT 750
BSNT_03427___ 751 AATGCCCTGACAGAGTCGACGAGGAAAACATGGCAGATGGTCAAACAAGG 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23030___yp 751 AATGCCCTGACAGAGTCGACGAGGAAAACATGGCAGATGGTCAAACAAGG 800
BSNT_03427___ 801 GTTTCCGATACATCGAATTGCTGAAATCAGAAAGCTGAAAACAGCGACGA 850
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU23030___yp 801 GTTTCCGATACAGCGAATTGCTGAAATCAGAAAGCTGAAAACAGCGACGA 850
BSNT_03427___ 851 TTGAAGACCACATTGTCGAGATTTCTCTCCATGAGCCTGCGTTTATGATT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23030___yp 851 TTGAAGACCACATTGTCGAGATTTCTCTCCATGAGCCTGCGTTTATGATT 900
BSNT_03427___ 901 AATGATTATGTATCAGCAGAAGACCAGCTCCAAATCGCAGAGTTTGCCAA 950
|||||.|||||||||||||||||||||||.||||||||||||||||||||
BSU23030___yp 901 AATGACTATGTATCAGCAGAAGACCAGCTTCAAATCGCAGAGTTTGCCAA 950
BSNT_03427___ 951 ACGGATGCGGACGAATAAAATCAAACAAATTCGCGACGGGCTGGAACAGC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23030___yp 951 ACGGATGCGGACGAATAAAATCAAACAAATTCGCGACGGGCTGGAACAGC 1000
BSNT_03427___ 1001 GGTTCAGCTACTTTCAAATCAGACTGGCATTGACAAAGCAGGTGCAGCAA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23030___yp 1001 GGTTCAGCTACTTTCAAATCAGACTGGCATTGACAAAGCAGGTGCAGCAA 1050
BSNT_03427___ 1051 TATGACTAA 1059
|||||||||
BSU23030___yp 1051 TATGACTAA 1059
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