Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_03412 and BSU22930

See Amino acid alignment / Visit BSNT_03412 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:09
# Commandline: needle
#    -asequence dna-align/BSNT_03412___sleB.1.22522.seq
#    -bsequence dna-align/BSU22930___sleB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03412___sleB-BSU22930___sleB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03412___sleB-BSU22930___sleB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03412___sleB
# 2: BSU22930___sleB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 918
# Identity:     908/918 (98.9%)
# Similarity:   908/918 (98.9%)
# Gaps:           0/918 ( 0.0%)
# Score: 4500.0
# 
#
#=======================================

BSNT_03412___      1 ATGAAGTCCAAAGGATCGATTATGGCATGTCTCATCCTTTTTTCCTTTAC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22930___sl      1 ATGAAGTCCAAAGGATCGATTATGGCATGTCTCATCCTTTTTTCCTTTAC     50

BSNT_03412___     51 AATAACGACGTTTTTCAATACTGAAACCATCTCTGCCTTTTCGAATCAGG    100
                     |||||||||||||.|.|||||||||||.||||||||||||||||||||||
BSU22930___sl     51 AATAACGACGTTTATTAATACTGAAACGATCTCTGCCTTTTCGAATCAGG    100

BSNT_03412___    101 TCATTCAAAGAGGGGCAACCGGGGACGATGTGGTCGAACTTCAGGCGCGT    150
                     |||||||||||||||||||.|||||.|||||||||||.||||||||||||
BSU22930___sl    101 TCATTCAAAGAGGGGCAACAGGGGATGATGTGGTCGAGCTTCAGGCGCGT    150

BSNT_03412___    151 CTTCAATACAACGGATATTATAACGGAAAAATTGACGGGGTTTATGGATG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22930___sl    151 CTTCAATACAACGGATATTATAACGGAAAAATTGACGGGGTTTATGGATG    200

BSNT_03412___    201 GGGGACGTACTGGGCAGTTCGGAATTTTCAGGATCAATTCGGGTTAAAAG    250
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU22930___sl    201 GGGGACGTACTGGGCAGTTCGAAATTTTCAGGATCAATTCGGGTTAAAAG    250

BSNT_03412___    251 AGGTTGACGGCCTTGTAGGAGCTAAAACAAAGCAAACCTTAATATGTAAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22930___sl    251 AGGTTGACGGCCTTGTAGGAGCTAAAACAAAGCAAACCTTAATATGTAAA    300

BSNT_03412___    301 TCAAAATACTATCGTGAATATGTCATGGAACAACTCAATAAAGGGAATAC    350
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU22930___sl    301 TCAAAATACTATCGTGAATATGTCATGGAACAGCTCAATAAAGGGAATAC    350

BSNT_03412___    351 ATTCACGCATTACGGAAAAATTCCGCTAAAGTATCAGACGAAACCATCAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22930___sl    351 ATTCACGCATTACGGAAAAATTCCGCTAAAGTATCAGACGAAACCATCAA    400

BSNT_03412___    401 AAGCAGCAACACAAAAGGCAAGACAACAAGCAGAAGCACGGCAGAAACAG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22930___sl    401 AAGCAGCAACACAAAAGGCAAGACAACAAGCAGAAGCACGGCAGAAACAG    450

BSNT_03412___    451 CCTGCGGAAAAAACAACGCAGCAGCCTAAAGCGAATGCGAATAAACAGCA    500
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU22930___sl    451 CCTGCGGAAAAAACAACGCAGAAGCCTAAAGCGAATGCGAATAAACAGCA    500

BSNT_03412___    501 AAACAATACACCAGCAAAAGCAAGAAAACAGGATGCGGTAGCAGCGAACA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22930___sl    501 AAACAATACACCAGCAAAAGCAAGAAAACAGGATGCGGTAGCAGCGAACA    550

BSNT_03412___    551 TGCCTGGTGGATTTTCCAACAACGATATCAGGCTGCTTGCTCAAGCGGTT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22930___sl    551 TGCCTGGTGGATTTTCCAACAACGATATCAGGCTGCTTGCTCAAGCGGTT    600

BSNT_03412___    601 TATGGCGAAGCCCGGGGCGAGCCGTACGAGGGACAGGTTGCTATTGCAGC    650
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU22930___sl    601 TATGGCGAAGCCCGGGGCGAGCCGTACGAGGGGCAGGTTGCTATTGCAGC    650

BSNT_03412___    651 AGTCATTTTAAACCGTTTGAACAGCCCGTTATTTCCAAATTCAGTAGCGG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22930___sl    651 AGTCATTTTAAACCGTTTGAACAGCCCGTTATTTCCAAATTCAGTAGCGG    700

BSNT_03412___    701 GGGTTATTTTTGAGCCGCTTGCCTTCACAGCAGTAGCCGACGGACAAATT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22930___sl    701 GGGTTATTTTTGAGCCGCTTGCCTTCACAGCAGTAGCCGACGGACAAATT    750

BSNT_03412___    751 TACATGCAGCCGAATGAAACGGCACGAGAAGCAGTGCTGGATGCCATCAA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22930___sl    751 TACATGCAGCCGAATGAAACGGCACGAGAAGCAGTGCTGGATGCCATCAA    800

BSNT_03412___    801 TGGCTGGGACCCATCAGAGGAAGCACTTTACTACTTTAATCCGGATACGG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22930___sl    801 TGGCTGGGACCCATCAGAGGAAGCACTTTACTACTTTAATCCGGATACGG    850

BSNT_03412___    851 CTACAAGTCCGTGGATTTGGGGGCGTCCGCAGATTAAAAGAATCGGTAAA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22930___sl    851 CTACAAGTCCGTGGATTTGGGGGCGTCCGCAGATTAAAAGAATCGGTAAA    900

BSNT_03412___    901 CACATTTTCTGTGAGTAG    918
                     ||||||||||||||||||
BSU22930___sl    901 CACATTTTCTGTGAGTAG    918


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.