Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03399 and BSU22860

See Amino acid alignment / Visit BSNT_03399 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:08
# Commandline: needle
#    -asequence dna-align/BSNT_03399___yphA.1.22522.seq
#    -bsequence dna-align/BSU22860___yphA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03399___yphA-BSU22860___yphA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03399___yphA-BSU22860___yphA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03399___yphA
# 2: BSU22860___yphA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 600
# Identity:     597/600 (99.5%)
# Similarity:   597/600 (99.5%)
# Gaps:           0/600 ( 0.0%)
# Score: 2973.0
# 
#
#=======================================

BSNT_03399___      1 ATGGAACAATTTTATTACTATTGGTCAATGTGGTTTCTGTGGGTTCTGAC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22860___yp      1 ATGGAACAATTTTATTACTATTGGTCAATGTGGTTTCTGTGGGTTCTGAC     50

BSNT_03399___     51 AACATTTATTTTTGAAAAGACGAAAAGACGAATTGCCGTCTCTGTCTTTA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22860___yp     51 AACATTTATTTTTGAAAAGACGAAAAGACGAATTGCCGTCTCTGTCTTTA    100

BSNT_03399___    101 TTTTAACTAATATTATTCTAAGCATACATGACATCGCTTTATATTTTTCC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22860___yp    101 TTTTAACTAATATTATTCTAAGCATACATGACATCGCTTTATATTTTTCC    150

BSNT_03399___    151 CTGAATGTTGCATATTTGATGTTTTTCGTTTGCGGATGTGTCTATGCCGG    200
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU22860___yp    151 CTGAATGCTGCATATTTGATGTTTTTCGTTTGCGGATGTGTCTATGCCGG    200

BSNT_03399___    201 GTATTTGGGAATGTATCGTTTTCGTTACATCATGGTCTATCTGACGCTCG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU22860___yp    201 GTATTTGGGAATGTATCGTTTTCGTTACATCATGGTCTATCTGACGCTTG    250

BSNT_03399___    251 TTGCCGCGTATGCGTTTGTTTATCTTTTTGCATTATATGACCCGGTTTGG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22860___yp    251 TTGCCGCGTATGCGTTTGTTTATCTTTTTGCATTATATGACCCGGTTTGG    300

BSNT_03399___    301 TTCATCATAAAACCTGAGTGGGCTGCTGTTATATTAATAGTGCTTTTAAC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22860___yp    301 TTCATCATAAAACCTGAGTGGGCTGCTGTTATATTAATAGTGCTTTTAAC    350

BSNT_03399___    351 AGCTTCTGTTGAAAGGAATTTTGAGAAGCAGCTTGTCTTATTTGTCCTAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22860___yp    351 AGCTTCTGTTGAAAGGAATTTTGAGAAGCAGCTTGTCTTATTTGTCCTAG    400

BSNT_03399___    401 GGATGTGCCAAGGCGAACTGGTGTATTCATTTGTGATCCAGAAGTTGGCC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22860___yp    401 GGATGTGCCAAGGCGAACTGGTGTATTCATTTGTGATCCAGAAGTTGGCC    450

BSNT_03399___    451 GGGGCTATGGCTGTCGGCGGCTTTCAATGGCTGAATGCGTGTTCTGCGGG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22860___yp    451 GGGGCTATGGCTGTCGGCGGCTTTCAATGGCTGAATGCGTGTTCTGCGGG    500

BSNT_03399___    501 AATGATATTGCTGTTTGGCATATCTAAATACGAACACCTCGCAAGCCAGA    550
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU22860___yp    501 GATGATATTGCTGTTTGGCATATCTAAATACGAACACCTCGCAAGCCAGA    550

BSNT_03399___    551 TTGGTCAGAAAAGCAAAAGATCAAACAAAGGAGCTACCAAAATGTCATGA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22860___yp    551 TTGGTCAGAAAAGCAAAAGATCAAACAAAGGAGCTACCAAAATGTCATGA    600


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