Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_03388 and BSU22790

See Amino acid alignment / Visit BSNT_03388 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:06
# Commandline: needle
#    -asequence dna-align/BSNT_03388___hbs.1.22522.seq
#    -bsequence dna-align/BSU22790___hbs.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03388___hbs-BSU22790___hbs.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03388___hbs-BSU22790___hbs.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03388___hbs
# 2: BSU22790___hbs
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 279
# Identity:     277/279 (99.3%)
# Similarity:   277/279 (99.3%)
# Gaps:           0/279 ( 0.0%)
# Score: 1377.0
# 
#
#=======================================

BSNT_03388___      1 ATGAACAAAACAGAACTTATCAATGCGGTTGCTGAAGCAAGCGAATTGTC     50
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU22790___hb      1 ATGAACAAAACAGAACTTATCAATGCGGTTGCAGAAGCAAGCGAATTGTC     50

BSNT_03388___     51 TAAAAAAGACGCTACAAAAGCAGTTGACTCTGTTTTTGATACGATCTTAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22790___hb     51 TAAAAAAGACGCTACAAAAGCAGTTGACTCTGTTTTTGATACGATCTTAG    100

BSNT_03388___    101 ATGCACTTAAAAACGGTGATAAAATCCAACTGATCGGTTTTGGTAACTTC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22790___hb    101 ATGCACTTAAAAACGGTGATAAAATCCAACTGATCGGTTTTGGTAACTTC    150

BSNT_03388___    151 GAGGTGCGTGAACGTTCTGCACGTAAAGGACGCAACCCTCAAACAGGTGA    200
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU22790___hb    151 GAGGTGCGTGAACGTTCTGCACGTAAAGGACGCAATCCTCAAACAGGTGA    200

BSNT_03388___    201 AGAAATCGAAATTCCAGCAAGCAAAGTACCTGCTTTCAAACCAGGTAAAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22790___hb    201 AGAAATCGAAATTCCAGCAAGCAAAGTACCTGCTTTCAAACCAGGTAAAG    250

BSNT_03388___    251 CGCTTAAAGACGCAGTTGCCGGAAAATAA    279
                     |||||||||||||||||||||||||||||
BSU22790___hb    251 CGCTTAAAGACGCAGTTGCCGGAAAATAA    279


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.