Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_03378 and BSU22720

See Amino acid alignment / Visit BSNT_03378 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:06
# Commandline: needle
#    -asequence dna-align/BSNT_03378___cheR.1.22522.seq
#    -bsequence dna-align/BSU22720___cheR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03378___cheR-BSU22720___cheR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03378___cheR-BSU22720___cheR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03378___cheR
# 2: BSU22720___cheR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 771
# Identity:     769/771 (99.7%)
# Similarity:   769/771 (99.7%)
# Gaps:           0/771 ( 0.0%)
# Score: 3837.0
# 
#
#=======================================

BSNT_03378___      1 ATGGATACATACAGCGTATTTACAACGAAATGGAAACAATTAACCGGAGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22720___ch      1 ATGGATACATACAGCGTATTTACAACGAAATGGAAACAATTAACCGGAGT     50

BSNT_03378___     51 CGATTTAACACTATATAAAGAAGCACAAATGAAGAGAAGGCTAACGTCAC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22720___ch     51 CGATTTAACACTATATAAAGAAGCACAAATGAAGAGAAGGCTAACGTCAC    100

BSNT_03378___    101 TTTATGAGAAAAAGGGGTTCCAAAGCTTTAAGGACTTTGCTGCGGCATTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22720___ch    101 TTTATGAGAAAAAGGGGTTCCAAAGCTTTAAGGACTTTGCTGCGGCATTG    150

BSNT_03378___    151 GAAAAGGAACAAGCTCTCTTAAATGAAACATTGGACAGAATGACGATCAA    200
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU22720___ch    151 GAAAAGGATCAAGCTCTCTTAAATGAAACATTGGACAGAATGACGATCAA    200

BSNT_03378___    201 TGTTTCAGAATTTTATCGTAATTATAAAAGATGGGAAGTTCTTGAGACTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22720___ch    201 TGTTTCAGAATTTTATCGTAATTATAAAAGATGGGAAGTTCTTGAGACTG    250

BSNT_03378___    251 CAATTCTGCCGTTAATCAAGACCTCTAGGCCTTTAAAAATTTGGAGTGCC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22720___ch    251 CAATTCTGCCGTTAATCAAGACCTCTAGGCCTTTAAAAATTTGGAGTGCC    300

BSNT_03378___    301 GCCTGCTCAACGGGGGAGGAGCCATACACGCTTGCCATGCTTTTGGACCA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22720___ch    301 GCCTGCTCAACGGGGGAGGAGCCATACACGCTTGCCATGCTTTTGGACCA    350

BSNT_03378___    351 GCAAAAAGGTCTTCCGGGCTATCAGATTTTAGCGACGGATATTGATGAAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22720___ch    351 GCAAAAAGGTCTTCCGGGCTATCAGATTTTAGCGACGGATATTGATGAAA    400

BSNT_03378___    401 AAGCATTGGAAAAAGCGAAAAAAGGCGTTTATCAGGAGCGGTCTTTACAG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22720___ch    401 AAGCATTGGAAAAAGCGAAAAAAGGCGTTTATCAGGAGCGGTCTTTACAG    450

BSNT_03378___    451 GAAGTGCCGCTATCTGTGAAAGATCGTTATTTTACGCAAAACGCAAATAG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22720___ch    451 GAAGTGCCGCTATCTGTGAAAGATCGTTATTTTACGCAAAACGCAAATAG    500

BSNT_03378___    501 AAGTTATGAAGTGAAAACGGAAATCAAAAAGAATATTACATTCAAAAAGC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22720___ch    501 AAGTTATGAAGTGAAAACGGAAATCAAAAAGAATATTACATTCAAAAAGC    550

BSNT_03378___    551 ACAATTTGCTGGCGGATCGTTATGAACAAGACTTTGACTTAATCGTGTGC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22720___ch    551 ACAATTTGCTGGCGGATCGTTATGAACAAGACTTTGACTTAATCGTGTGC    600

BSNT_03378___    601 CGCAATGTATTTATTTATTTTACAGAAAGCGCGAAGGAAGAGCTGTATTT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22720___ch    601 CGCAATGTATTTATTTATTTTACAGAAAGCGCGAAGGAAGAGCTGTATTT    650

BSNT_03378___    651 AAAAATGGCACATAGCTTGAAGAAGAATGGAGTTCTTTTTGTCGGCAGCA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22720___ch    651 AAAAATGGCACATAGCTTGAAGAAGAATGGAGTTCTTTTTGTCGGCAGCA    700

BSNT_03378___    701 CCGAGCAAATCTTCAATCCCGAGAAGTTTGGCCTAGTCCCAGCCGATACA    750
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU22720___ch    701 CCGAGCAAATCTTCAATCCCGAGAAATTTGGCCTAGTCCCAGCCGATACA    750

BSNT_03378___    751 TTCTTTTATCAAAAAAGATAG    771
                     |||||||||||||||||||||
BSU22720___ch    751 TTCTTTTATCAAAAAAGATAG    771


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.