Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03370 and BSU22670

See Amino acid alignment / Visit BSNT_03370 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:05
# Commandline: needle
#    -asequence dna-align/BSNT_03370___trpD.1.22522.seq
#    -bsequence dna-align/BSU22670___trpD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03370___trpD-BSU22670___trpD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03370___trpD-BSU22670___trpD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03370___trpD
# 2: BSU22670___trpD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1017
# Identity:    1009/1017 (99.2%)
# Similarity:  1009/1017 (99.2%)
# Gaps:           0/1017 ( 0.0%)
# Score: 5013.0
# 
#
#=======================================

BSNT_03370___      1 ATGAACAGATTTCTACAATTGTGCGTTGACGGAAAAACCCTTACTGCCGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22670___tr      1 ATGAACAGATTTCTACAATTGTGCGTTGACGGAAAAACCCTTACTGCCGG     50

BSNT_03370___     51 TGAGGCTGAAACGCTGATGAATATGATGATGGCAGCGGAAATGACTCCTT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22670___tr     51 TGAGGCTGAAACGCTGATGAATATGATGATGGCAGCGGAAATGACTCCTT    100

BSNT_03370___    101 CTGAAATGGGTGGTATATTGTCAATTCTTGCTCATCGGGGGGAGACGCCA    150
                     ||||||||||.||.||||||||||||||||||||||||||||||||||||
BSU22670___tr    101 CTGAAATGGGGGGGATATTGTCAATTCTTGCTCATCGGGGGGAGACGCCA    150

BSNT_03370___    151 GAAGAGCTTGCGGGTTTTGTGAAGGCAATGCGGGCACACGCTCTTACAGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22670___tr    151 GAAGAGCTTGCGGGTTTTGTGAAGGCAATGCGGGCACACGCTCTTACAGT    200

BSNT_03370___    201 CGATGGACTTCCTGATATTGTTGATACATGCGGAACAGGGGGAGACGGTA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22670___tr    201 CGATGGACTTCCTGATATTGTTGATACATGCGGAACAGGGGGAGACGGTA    250

BSNT_03370___    251 TTTCCACTTTTAATATCTCAACGGCCTCGGCAATTGTTGCCTCGGCAGCT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22670___tr    251 TTTCCACTTTTAATATCTCAACGGCCTCGGCAATTGTTGCCTCGGCAGCT    300

BSNT_03370___    301 GGCGCGAAAATCGCTAAGCATGGCAATCGCTCTGTCTCTTCTAAAAGCGG    350
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU22670___tr    301 GGTGCGAAAATCGCTAAGCATGGCAATCGCTCTGTCTCTTCTAAAAGCGG    350

BSNT_03370___    351 AAGCGCTGATGTTTTAGAGGAGCTAGAGGTTTCTATTCAAACCACTCCCG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22670___tr    351 AAGCGCTGATGTTTTAGAGGAGCTAGAGGTTTCTATTCAAACCACTCCCG    400

BSNT_03370___    401 AAAAGGTCAAAAGCAGCATTGAAACAAACAACATGGGATTTCTTTTTGCG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22670___tr    401 AAAAGGTCAAAAGCAGCATTGAAACAAACAACATGGGATTTCTTTTTGCG    450

BSNT_03370___    451 CCGCTTTACTATTCGTCTATGAAACATGTAGCAGGTACTAGAAAAGAGCT    500
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU22670___tr    451 CCGCTTTACCATTCGTCTATGAAACATGTAGCAGGTACTAGAAAAGAGCT    500

BSNT_03370___    501 AGGTTTCAGAACGGTATTTAATCTGCTTGGGCCGCTCAGCAATCCTTTAC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22670___tr    501 AGGTTTCAGAACGGTATTTAATCTGCTTGGGCCGCTCAGCAATCCTTTAC    550

BSNT_03370___    551 AGGCGAAGCGTCAGGTGATTGGGGTCTATTCTGTTGAAAAAGCTGGACTG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22670___tr    551 AGGCGAAGCGTCAGGTGATTGGGGTCTATTCTGTTGAAAAAGCTGGACTG    600

BSNT_03370___    601 ATGGCAAGCGCACTGGAGACGTTTCAGCCGAAGCACGTTATGTTTGTATC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22670___tr    601 ATGGCAAGCGCACTGGAGACGTTTCAGCCGAAGCACGTTATGTTTGTATC    650

BSNT_03370___    651 AAGCCGTGACGGTTTAGATGAGCTTTCAATTACAGCACCGACCGACGTGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22670___tr    651 AAGCCGTGACGGTTTAGATGAGCTTTCAATTACAGCACCGACCGACGTGA    700

BSNT_03370___    701 TTGAATTAAAGGACGGAGAGCGCCGGGAATATACCGTTTCACCCGAAGAT    750
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU22670___tr    701 TTGAATTAAAGGACGGAGAGCGCCGGGAGTATACCGTTTCACCCGAAGAT    750

BSNT_03370___    751 TTCGGTTTCACAAATGGCAGACTTGAAGATTTACAGGTGCAGTCACCGAA    800
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU22670___tr    751 TTCGGTTTCACAAATGGCAGACTTGAAGATTTACAGGTGCAGTCTCCGAA    800

BSNT_03370___    801 AGAGAGCGCCTATCTCATTCAGAATATTTTTGAAAATAAAAGCAGCAGTT    850
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU22670___tr    801 AGAGAGCGCTTATCTCATTCAGAATATTTTTGAAAATAAAAGCAGCAGTT    850

BSNT_03370___    851 CCGCTTTATCTATTACGGCTTTTAATGCGGGAGCTGCGATTTACACGGCG    900
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU22670___tr    851 CCGCTTTATCTATTACGGCTTTTAATGCGGGTGCTGCGATTTACACGGCG    900

BSNT_03370___    901 GGAATTACCGCCTCACTGAAGGAAGGAACGGAGCTGGCGTTAGAGACGAT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22670___tr    901 GGAATTACCGCCTCACTGAAGGAAGGAACGGAGCTGGCGTTAGAGACGAT    950

BSNT_03370___    951 TACAAGCGGAGGCGCTGCCGCGCAGCTTGAACGACTAAAGCAGAAAGAGG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22670___tr    951 TACAAGCGGAGGCGCTGCCGCGCAGCTTGAACGACTAAAGCAGAAAGAGG   1000

BSNT_03370___   1001 AAGAGATCTATGCTTGA   1017
                     |||||||||||||||||
BSU22670___tr   1001 AAGAGATCTATGCTTGA   1017


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03370 and BSU22670

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
