Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03368 and BSU22650
See
Amino acid alignment /
Visit
BSNT_03368 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:04
# Commandline: needle
# -asequence dna-align/BSNT_03368___trpF.1.22522.seq
# -bsequence dna-align/BSU22650___trpF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03368___trpF-BSU22650___trpF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03368___trpF-BSU22650___trpF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03368___trpF
# 2: BSU22650___trpF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 648
# Identity: 641/648 (98.9%)
# Similarity: 641/648 (98.9%)
# Gaps: 0/648 ( 0.0%)
# Score: 3177.0
#
#
#=======================================
BSNT_03368___ 1 GTGAAGAAACCGGCATTAAAATATTGCGGTATTCGGTCACTAAAGGATTT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22650___tr 1 GTGAAGAAACCGGCATTAAAATATTGCGGTATTCGGTCACTAAAGGATTT 50
BSNT_03368___ 51 GCAGCTTGCGGCGGAATCACAGGCTGATTACCTAGGATTTATTTTTGCTG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22650___tr 51 GCAGCTTGCGGCGGAATCACAGGCTGATTACCTAGGATTTATTTTTGCTG 100
BSNT_03368___ 101 AAAGCAAACGAAAAGTATCTCCGGAAGATGTGAAAAAATGGCTGAACCAA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22650___tr 101 AAAGCAAACGAAAAGTATCTCCGGAAGATGTGAAAAAATGGCTGAACCAA 150
BSNT_03368___ 151 GCTCGTGTCGAAAAACAGGTTGCAGGTGTTTTTGATAATGAATCAATAGA 200
|.||||||||||||||||||||||||||||||||.|||||||||||||||
BSU22650___tr 151 GTTCGTGTCGAAAAACAGGTTGCAGGTGTTTTTGTTAATGAATCAATAGA 200
BSNT_03368___ 201 GACGATGTCACGTATAGCCAAGAGCTTGAAGCTCGACGTCATTCAGCTTC 250
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU22650___tr 201 GACGATGTCACGTATTGCCAAGAGCTTGAAGCTCGACGTCATTCAGCTTC 250
BSNT_03368___ 251 ACGGTGATGAAAAACCGGCGGATGCTGCTGCTCTTCGCAAGCTGACAGGC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22650___tr 251 ACGGTGATGAAAAACCGGCGGATGCTGCTGCTCTTCGCAAGCTGACAGGC 300
BSNT_03368___ 301 TGTGAAATATGGAAGGCGCTTCACCATCAAGATAACACAACTCAAGAAAT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22650___tr 301 TGTGAAATATGGAAGGCGCTTCACCATCAAGATAACACAACTCAAGAAAT 350
BSNT_03368___ 351 AGCCCGCTTTAAAGATAATGTTGACGGCTTTGTGATTGATTCATCTGTAA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22650___tr 351 AGCCCGCTTTAAAGATAATGTTGACGGCTTTGTGATTGATTCATCTGTAA 400
BSNT_03368___ 401 AAGGGTCTAGAGGCGGAACTGGTGTTGCATTTTCTTGGGAATGTGTTCCG 450
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU22650___tr 401 AAGGGTCTAGAGGCGGAACTGGTGTTGCATTTTCTTGGGAATGTGTGCCG 450
BSNT_03368___ 451 GAATATCAGCAGGCGGCTATTGGTAAACGCTGCTTTATCGCTGGCGGCGT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22650___tr 451 GAATATCAGCAGGCGGCTATTGGTAAACGCTGCTTTATCGCTGGCGGCGT 500
BSNT_03368___ 501 GAATCCGGATAGCATCACCGGCCTATTGAAATGGCAGCCAGAAGGAATTG 550
||||||||||||||||||..||||||||||||||||||||||||||||||
BSU22650___tr 501 GAATCCGGATAGCATCACACGCCTATTGAAATGGCAGCCAGAAGGAATTG 550
BSNT_03368___ 551 ACCTTGCCAGCGGAATTGAAAAAAACGGACAAAAAGATCAGAATCTGATG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22650___tr 551 ACCTTGCCAGCGGAATTGAAAAAAACGGACAAAAAGATCAGAATCTGATG 600
BSNT_03368___ 601 AGTCTTTTAGAAGAAAGGATGAACCGATATGTATCCATATCCGAATGA 648
||.|||||||||||||||||||||||||||||||||||||||||||||
BSU22650___tr 601 AGGCTTTTAGAAGAAAGGATGAACCGATATGTATCCATATCCGAATGA 648
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.