Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03365 and BSU22630

See Amino acid alignment / Visit BSNT_03365 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:04
# Commandline: needle
#    -asequence dna-align/BSNT_03365___trpA.1.22522.seq
#    -bsequence dna-align/BSU22630___trpA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03365___trpA-BSU22630___trpA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03365___trpA-BSU22630___trpA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03365___trpA
# 2: BSU22630___trpA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 804
# Identity:     793/804 (98.6%)
# Similarity:   793/804 (98.6%)
# Gaps:           0/804 ( 0.0%)
# Score: 3921.0
# 
#
#=======================================

BSNT_03365___      1 ATGTTTAAATTGGATCTTCAACCAACAGAAAAATTGTTTATCCCGTTTAT     50
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU22630___tr      1 ATGTTTAAATTGGATCTTCAACCATCAGAAAAATTGTTTATCCCGTTTAT     50

BSNT_03365___     51 TACGGCGGGCGATCCAGTTCCTGAGGTTTCGATTGAACTGGCGAAGTCAC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22630___tr     51 TACGGCGGGCGATCCAGTTCCTGAGGTTTCGATTGAACTGGCGAAGTCAC    100

BSNT_03365___    101 TCCAAAAAGCAGGCGCCACAGCATTGGAGCTTGGTGTTGCATACTCTGAC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22630___tr    101 TCCAAAAAGCAGGCGCCACAGCATTGGAGCTTGGTGTTGCATACTCTGAC    150

BSNT_03365___    151 CCGCTTGCAGACGGTCCGGTGATCCAGAGGGCTTCAAAGCGGGCACTTGA    200
                     |||||||||||||||||||||||||||.||||||||||||||||.|||||
BSU22630___tr    151 CCGCTTGCAGACGGTCCGGTGATCCAGCGGGCTTCAAAGCGGGCGCTTGA    200

BSNT_03365___    201 TCAAGGAATGAATATCGTAAAGGCAATCGAATTAGGCGGAGAAATGAAAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22630___tr    201 TCAAGGAATGAATATCGTAAAGGCAATCGAATTAGGCGGAGAAATGAAAA    250

BSNT_03365___    251 AAAACGGAGTGAATATTCCGATTATCCTCTTTACGTATTATAATCCTGTG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22630___tr    251 AAAACGGAGTGAATATTCCGATTATCCTCTTTACGTATTATAATCCTGTG    300

BSNT_03365___    301 TTACAATTGAACAAAGAATACTTTTTCGCTTTACTGCAGGAAAATCATAT    350
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU22630___tr    301 TTACAATTGAACAAAGAATACTTTTTCGCTTTACTGCGGGAAAATCATAT    350

BSNT_03365___    351 TGACGGTCTGCTTGTTCCGGATCTGCCACTAGAAGAAAGCAACAGCCTTC    400
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU22630___tr    351 TGACGGTCTGCTTGTTCCGGATCTGCCATTAGAAGAAAGCAACAGCCTTC    400

BSNT_03365___    401 AAGAGGAATGTAAAAGCCATGAGGTGACGTATATTTCTTTGGTTGCGCCG    450
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU22630___tr    401 AAGAGGAATGTAAAAGCCATGAGGTGACGTATATTTCTTTAGTTGCGCCG    450

BSNT_03365___    451 ACAAGCGAAAGCCGTTTGAAAACCATTATTGAACAAGCCGAGGGCTTCGT    500
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU22630___tr    451 ACAAGCGAAAGCCGTTTGAAAACCATTATTGAACAAGCCGAGGGGTTCGT    500

BSNT_03365___    501 CTACTGTGTGTCTTCTCTGGGTGTGACCGGTGTCCGCAATGAGTTCAATT    550
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU22630___tr    501 CTACTGTGTATCTTCTCTGGGTGTGACCGGTGTCCGCAATGAGTTCAATT    550

BSNT_03365___    551 CATCCGTGTACCCGTTCATTCGGACAGTGAAGAATCTCAGCACTGTTCCG    600
                     ||||||||||||||||||||||.||.||||||||||||||||||||||||
BSU22630___tr    551 CATCCGTGTACCCGTTCATTCGTACTGTGAAGAATCTCAGCACTGTTCCG    600

BSNT_03365___    601 GTCGCTGTAGGGTTCGGTATATCAAACCGTGAACAGGTCATAAAGATGAA    650
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU22630___tr    601 GTTGCTGTAGGGTTCGGTATATCAAACCGTGAACAGGTCATAAAGATGAA    650

BSNT_03365___    651 TGAAATTAGTGACGGTGTCGTAGTGGGAAGTGCGCTCGTCAGAAAAATAG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22630___tr    651 TGAAATTAGTGACGGTGTCGTAGTGGGAAGTGCGCTCGTCAGAAAAATAG    700

BSNT_03365___    701 AAGAATTAAAGGACCGGCTCATCAGCGCTGAAACGAGAAATCAGGCGCTG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22630___tr    701 AAGAATTAAAGGACCGGCTCATCAGCGCTGAAACGAGAAATCAGGCGCTG    750

BSNT_03365___    751 CAGGAGTTTGAGGATTATGCAATGGCGTTTAGCGGCTTGTACAGTTTAAA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22630___tr    751 CAGGAGTTTGAGGATTATGCAATGGCGTTTAGCGGCTTGTACAGTTTAAA    800

BSNT_03365___    801 ATGA    804
                     ||||
BSU22630___tr    801 ATGA    804


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