Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03358 and BSU22580

See Amino acid alignment / Visit BSNT_03358 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:03
# Commandline: needle
#    -asequence dna-align/BSNT_03358___ypiB.1.22522.seq
#    -bsequence dna-align/BSU22580___ypiB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03358___ypiB-BSU22580___ypiB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03358___ypiB-BSU22580___ypiB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03358___ypiB
# 2: BSU22580___ypiB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 540
# Identity:     540/540 (100.0%)
# Similarity:   540/540 (100.0%)
# Gaps:           0/540 ( 0.0%)
# Score: 2700.0
# 
#
#=======================================

BSNT_03358___      1 ATGCAGACCCCTGTTTCTGTCAATGAGAAAAAAGATTTTATCCGTTGGTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22580___yp      1 ATGCAGACCCCTGTTTCTGTCAATGAGAAAAAAGATTTTATCCGTTGGTT     50

BSNT_03358___     51 TTTAAACCATTATCAGTTAAAGCGCCGAGAGTGCGTTTGGATCTTGAACT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22580___yp     51 TTTAAACCATTATCAGTTAAAGCGCCGAGAGTGCGTTTGGATCTTGAACT    100

BSNT_03358___    101 ACTTAATGAGCCATGATTCTCTCATGGAGAAGGTTCATTTTGTGGAGCAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22580___yp    101 ACTTAATGAGCCATGATTCTCTCATGGAGAAGGTTCATTTTGTGGAGCAG    150

BSNT_03358___    151 GCTGAATTTTGCCCGAGAGGCATTATAATGTCAACACATTGTGTTGAAGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22580___yp    151 GCTGAATTTTGCCCGAGAGGCATTATAATGTCAACACATTGTGTTGAAGA    200

BSNT_03358___    201 AGTTCCGTTCCGGTTCTATAAAGAGAATGTCATGACTACCGACGCGGAAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22580___yp    201 AGTTCCGTTCCGGTTCTATAAAGAGAATGTCATGACTACCGACGCGGAAA    250

BSNT_03358___    251 AATCTTTTCATGATATTAGATTAAATAAACAGCAGGATTTGTTTATCCAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22580___yp    251 AATCTTTTCATGATATTAGATTAAATAAACAGCAGGATTTGTTTATCCAG    300

BSNT_03358___    301 CTTAATTTCCGTTCGGCTTACAGCTCACCTGAATATGCGGCGGTGCTGGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22580___yp    301 CTTAATTTCCGTTCGGCTTACAGCTCACCTGAATATGCGGCGGTGCTGGA    350

BSNT_03358___    351 GTCCAACCCGCATATTCCGAAAAACCTTTTTGAGAATAAAAAAGATCAGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22580___yp    351 GTCCAACCCGCATATTCCGAAAAACCTTTTTGAGAATAAAAAAGATCAGG    400

BSNT_03358___    401 GATTGGCGGAACAGATTTTAGAGCACGCTATTTCCACATTCCAAAGAGAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22580___yp    401 GATTGGCGGAACAGATTTTAGAGCACGCTATTTCCACATTCCAAAGAGAA    450

BSNT_03358___    451 AAATTATTAAAAGACATTGACGACGCGTTAGATCGTCATGATAAAGAGGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22580___yp    451 AAATTATTAAAAGACATTGACGACGCGTTAGATCGTCATGATAAAGAGGC    500

BSNT_03358___    501 ATTTGAACAATTATCGCGCCAATTAAATCAGCTCACATAA    540
                     ||||||||||||||||||||||||||||||||||||||||
BSU22580___yp    501 ATTTGAACAATTATCGCGCCAATTAAATCAGCTCACATAA    540


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