Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03354 and BSU22540

See Amino acid alignment / Visit BSNT_03354 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:02
# Commandline: needle
#    -asequence dna-align/BSNT_03354___qcrC.1.22522.seq
#    -bsequence dna-align/BSU22540___qcrC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03354___qcrC-BSU22540___qcrC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03354___qcrC-BSU22540___qcrC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03354___qcrC
# 2: BSU22540___qcrC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 768
# Identity:     762/768 (99.2%)
# Similarity:   762/768 (99.2%)
# Gaps:           0/768 ( 0.0%)
# Score: 3786.0
# 
#
#=======================================

BSNT_03354___      1 ATGCACCGGGGCAAAGGGATGAAATTTGTAGGCGACTCAAGGATACCGGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22540___qc      1 ATGCACCGGGGCAAAGGGATGAAATTTGTAGGCGACTCAAGGATACCGGC     50

BSNT_03354___     51 TGAAAAAAAGCCGAATATACCGAAGGATTATTCGGAGTATCCCGGTAAAA    100
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU22540___qc     51 TGAAAAAAAGCCGAATATACCGAAGGATTATTCGGAGTATCCGGGTAAAA    100

BSNT_03354___    101 CAGAGGCTTTCTGGCCAAATTTCTTGTTAAAGGAATGGATGGTTGGAGCT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22540___qc    101 CAGAGGCTTTCTGGCCAAATTTCTTGTTAAAGGAATGGATGGTTGGAGCT    150

BSNT_03354___    151 GTCTTTCTCATCGGTTTTCTCGTTTTGACGATTGTGCATCAGCCGCCTTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22540___qc    151 GTCTTTCTCATCGGTTTTCTCGTTTTGACGATTGTGCATCAGCCGCCTTT    200

BSNT_03354___    201 GGAGCGGATGGCGGACCCGACTGATACTGGTTATATTCCGCTGCCGGATT    250
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU22540___qc    201 AGAGCGGATGGCGGACCCGACTGATACTGGTTATATTCCGCTGCCGGATT    250

BSNT_03354___    251 GGTATTTTCTTTTCTTATACCAGCTGTTGAAGTATGAATACGCCGCCGGA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22540___qc    251 GGTATTTTCTTTTCTTATACCAGCTGTTGAAGTATGAATACGCCGCCGGA    300

BSNT_03354___    301 AGCTTTACAGTGGTCGGCGCCATGATTATGCCAGGTCTCGCTTTTGGGGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22540___qc    301 AGCTTTACAGTGGTCGGCGCCATGATTATGCCAGGTCTCGCTTTTGGGGC    350

BSNT_03354___    351 CCTGCTTTTGGCTCCATTCCTAGACAGAGGGACAGAAAGAAGGCCGTGGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22540___qc    351 CCTGCTTTTGGCTCCATTCCTAGACAGAGGGACAGAAAGAAGGCCGTGGA    400

BSNT_03354___    401 AGCGTCCGGTCGCTGTCGGTATGATGCTTCTGGCCATTTCCGCTGCTGTA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22540___qc    401 AGCGTCCGGTCGCTGTCGGTATGATGCTTCTGGCCATTTCCGCTGCTGTA    450

BSNT_03354___    451 TTTTTGACGTGGCAGTCAGTTGCTACTCATGACTGGGCCAAGGCAGAAGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22540___qc    451 TTTTTGACGTGGCAGTCAGTTGCTACTCATGACTGGGCCAAGGCAGAAGA    500

BSNT_03354___    501 ACAGGGGAAAATCACAAAAGAAGCCGACATTGACACCAATGCAGAAGGAT    550
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU22540___qc    501 ACAGGGGAAAATTACAAAAGAAGCCGACATTGACACCAATGCAGAAGGAT    550

BSNT_03354___    551 ATAAGGTCTTTAAGGAACAGGGCTGTATTTCTTGCCATGGGGATAACCTT    600
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU22540___qc    551 ATAAGGTTTTTAAGGAACAGGGCTGTATTTCTTGCCATGGGGATAACCTT    600

BSNT_03354___    601 CAGGGAGGAGCGGCCGGGCCTTCATTGGTTGACAGCGGGCTGAAACCGGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22540___qc    601 CAGGGAGGAGCGGCCGGGCCTTCATTGGTTGACAGCGGGCTGAAACCGGA    650

BSNT_03354___    651 TGAAATCAAAAAAATAGCTGTAGAAGGGAAAGGCAAAATGCCGGCGGGTG    700
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU22540___qc    651 TGAAATCAAAAAAATCGCTGTAGAAGGGAAAGGCAAAATGCCGGCGGGTG    700

BSNT_03354___    701 TGTTCAAAGGAAATGATAAGCAACTCGAAGAACTTGCAAAATTTATTTCT    750
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU22540___qc    701 TGTTCAAAGGAAATGATAAGCAGCTCGAAGAACTTGCAAAATTTATTTCT    750

BSNT_03354___    751 GAAACAACCGCAAAATAA    768
                     ||||||||||||||||||
BSU22540___qc    751 GAAACAACCGCAAAATAA    768


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