Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
DNA alignment: BSNT_03353 and BSU22530

See Amino acid alignment / Visit BSNT_03353 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:02
# Commandline: needle
#    -asequence dna-align/BSNT_03353___ypjA.1.22522.seq
#    -bsequence dna-align/BSU22530___ypjA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03353___ypjA-BSU22530___ypjA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03353___ypjA-BSU22530___ypjA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03353___ypjA
# 2: BSU22530___ypjA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 594
# Identity:     548/594 (92.3%)
# Similarity:   548/594 (92.3%)
# Gaps:          36/594 ( 6.1%)
# Score: 2700.0
# 
#
#=======================================

BSNT_03353___      1 GTGAAATGGTTTCAATATGTATTAGGGCAGCGGCCGATGCTTATTCTTGT     50
                                                         ||||||||||||||
BSU22530___yp      1 ------------------------------------ATGCTTATTCTTGT     14

BSNT_03353___     51 CTTAGCCATTAATTTTCTGGGAACGGTTTACGGCTACTATTGGTACTTGC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22530___yp     15 CTTAGCCATTAATTTTCTGGGAACGGTTTACGGCTACTATTGGTACTTGC     64

BSNT_03353___    101 CGCAGCTTTTGGAGACACCGGCCCGTTTCCTGATTTTTGTTCCGGACAGT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22530___yp     65 CGCAGCTTTTGGAGACACCGGCCCGTTTCCTGATTTTTGTTCCGGACAGT    114

BSNT_03353___    151 CCGACAGCAACGTTTTTCTTTCTGTTTGTGCTGCTTGCCTTTCTCATGAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22530___yp    115 CCGACAGCAACGTTTTTCTTTCTGTTTGTGCTGCTTGCCTTTCTCATGAA    164

BSNT_03353___    201 ACGGAATGCTCCGCTCTTTGAGGCGCTTGCGCTAGTAACCCTCGTAAAGT    250
                     |||||||||||||||.||.|||||||||||||||||.|||||||||||||
BSU22530___yp    165 ACGGAATGCTCCGCTTTTAGAGGCGCTTGCGCTAGTTACCCTCGTAAAGT    214

BSNT_03353___    251 ATGGCCTATGGGCGGTGGCTATGAATTTTCTTGTGCTTGCAGTAACTGGT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22530___yp    215 ATGGCCTATGGGCGGTGGCTATGAATTTTCTTGTGCTTGCAGTAACTGGT    264

BSNT_03353___    301 GACTTGCCGTGGGAGGGCTACATGCTAATTGCTTCGCATTTTGCAATGGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22530___yp    265 GACTTGCCGTGGGAGGGCTACATGCTAATTGCTTCGCATTTTGCAATGGC    314

BSNT_03353___    351 TGTTCAAGGCGTATTATACAGTCCGTATTTTCGTTTTTCATTTTGGCATC    400
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU22530___yp    315 AGTTCAAGGCGTATTATACAGTCCGTATTTTCGTTTTTCATTTTGGCATC    364

BSNT_03353___    401 TTGCAATTGCTGCAGTCTGGACACTGCATAACGATGTCATTGACTACTTG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22530___yp    365 TTGCAATTGCTGCAGTCTGGACACTGCATAACGATGTCATTGACTACTTG    414

BSNT_03353___    451 TTTGATATGATGCCGCGGTATTCAATGCTTTCTGATTATATGACTGAAAT    500
                     ||||||||||||||||..||.||.||||||||||||||||||||||||||
BSU22530___yp    415 TTTGATATGATGCCGCAATACTCTATGCTTTCTGATTATATGACTGAAAT    464

BSNT_03353___    501 AGGATACGGAACATTTTGGCTAAGCATCTTCTCAATCGCGCTTGCTTACT    550
                     ||||||||||||||||||||||||.|||||.|||||||||||||||||||
BSU22530___yp    465 AGGATACGGAACATTTTGGCTAAGTATCTTTTCAATCGCGCTTGCTTACT    514

BSNT_03353___    551 TTCTTGTGGTCTCAAAAAAGCAAACGAAGCTTGAGCTGATGTAA    594
                     ||||||||||||||||||||||||||||||||||||||||||||
BSU22530___yp    515 TTCTTGTGGTCTCAAAAAAGCAAACGAAGCTTGAGCTGATGTAA    558


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03353 and BSU22530

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
