Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03352 and BSU22520

See Amino acid alignment / Visit BSNT_03352 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:02
# Commandline: needle
#    -asequence dna-align/BSNT_03352___ypjB.1.22522.seq
#    -bsequence dna-align/BSU22520___ypjB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03352___ypjB-BSU22520___ypjB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03352___ypjB-BSU22520___ypjB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03352___ypjB
# 2: BSU22520___ypjB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 795
# Identity:     788/795 (99.1%)
# Similarity:   788/795 (99.1%)
# Gaps:           0/795 ( 0.0%)
# Score: 3912.0
# 
#
#=======================================

BSNT_03352___      1 ATGAAACGAAAGCTGACGATCTGTTTGTTGATTGCACTTATTTTTTATAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22520___yp      1 ATGAAACGAAAGCTGACGATCTGTTTGTTGATTGCACTTATTTTTTATAA     50

BSNT_03352___     51 TGGAAATGCCAAGGCTGCAGAGCGGGGAAGCCTCGAGGAATTGAATGATT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22520___yp     51 TGGAAATGCCAAGGCTGCAGAGCGGGGAAGCCTCGAGGAATTGAATGATT    100

BSNT_03352___    101 TATCCGATACAGTCTTTCAAATGACCCGACAGGCAAAATATGAAGAGGCG    150
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU22520___yp    101 TATCCGATACAGTCTTTCAAATGACCCGACAGGCGAAATATGAAGAGGCG    150

BSNT_03352___    151 CTTCAAGTCTTGGAGTATTTTGAAAAAACATTAAAATCCGCTGAGAAAAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22520___yp    151 CTTCAAGTCTTGGAGTATTTTGAAAAAACATTAAAATCCGCTGAGAAAAA    200

BSNT_03352___    201 ACAGCAAGACCCCATGCTAACGGGATCCCAAATCCGTCAAATCACATTGG    250
                     |||||||||||||||||||||||||.|||||||.||||||||||||||||
BSU22520___yp    201 ACAGCAAGACCCCATGCTAACGGGAGCCCAAATTCGTCAAATCACATTGG    250

BSNT_03352___    251 GCTATAATGATATGGTTCGGAGTTTAAAGCAAGCTGATACATCAGACACA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22520___yp    251 GCTATAATGATATGGTTCGGAGTTTAAAGCAAGCTGATACATCAGACACA    300

BSNT_03352___    301 CAAAAACTCAGAGCAGCCGCGCAGTTCAGGATGCTGATGGATGCGGTTGA    350
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU22520___yp    301 CAAAAACTCAGAGCAGCCGCGCAGTTCAGAATGCTGATGGATGCGGTTGA    350

BSNT_03352___    351 AAATCGGTCTGACCCGCTTTGGGGCTCACTGGAAAAACCGATTATGGAAG    400
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU22520___yp    351 CAATCGGTCTGACCCGCTTTGGGGCTCACTGGAAAAACCGATTATGGAAG    400

BSNT_03352___    401 CTTTTACTGAACTGAAGCGAGATGTCCAAAAGAATGGAAGCACAAGCTTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22520___yp    401 CTTTTACTGAACTGAAGCGAGATGTCCAAAAGAATGGAAGCACAAGCTTT    450

BSNT_03352___    451 CATGAAAAATGGAATGAATTTATCAGTTTATATGACTTGATTTACCCCAG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22520___yp    451 CATGAAAAATGGAATGAATTTATCAGTTTATATGACTTGATTTACCCCAG    500

BSNT_03352___    501 TCTTACAATCGATGTATCAGAGGATCAGCTTGAAACAGTCGGAAAACATA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22520___yp    501 TCTTACAATCGATGTATCAGAGGATCAGCTTGAAACAGTCGGAAAACATA    550

BSNT_03352___    551 TAGACGTTATTGAGCAAGAGGAATTTCAGCAAATGACAGAGAGCACGAAG    600
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU22520___yp    551 TAGATGTTATTGAGCAAGAGGAATTTCAGCAAATGACAGAGAGCACGAAG    600

BSNT_03352___    601 CTTGAACGGCTTTCCCTTCTTCAGCATGACCTGAAAAATGTGTTTGACAG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22520___yp    601 CTTGAACGGCTTTCCCTTCTTCAGCATGACCTGAAAAATGTGTTTGACAG    650

BSNT_03352___    651 GGTGGAGGAGGATGATGCCGATCCGTCTTTACTCTGGGTGATGATTACAA    700
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU22520___yp    651 GGTGGAGGAGGATGATGCCGATCCGTCTTTACTCTGGGTGATCATTACAA    700

BSNT_03352___    701 CCGGCAGTATCATCATTACTGCTCTTACCTATGTCGGTTACAGAAAGTAC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22520___yp    701 CCGGCAGTATCATCATTACTGCTCTTACCTATGTCGGTTACAGAAAGTAC    750

BSNT_03352___    751 AAGGCGGAAAAAAACAAGCTGAAAAAAAGGGACTACCCTAAATAA    795
                     |||||||||||||||||||||||||||||||||||||||||||||
BSU22520___yp    751 AAGGCGGAAAAAAACAAGCTGAAAAAAAGGGACTACCCTAAATAA    795


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