Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
DNA alignment: BSNT_03343 and BSU22440

See Amino acid alignment / Visit BSNT_03343 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:01
# Commandline: needle
#    -asequence dna-align/BSNT_03343___birA.1.22522.seq
#    -bsequence dna-align/BSU22440___birA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03343___birA-BSU22440___birA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03343___birA-BSU22440___birA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03343___birA
# 2: BSU22440___birA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 978
# Identity:     972/978 (99.4%)
# Similarity:   972/978 (99.4%)
# Gaps:           0/978 ( 0.0%)
# Score: 4836.0
# 
#
#=======================================

BSNT_03343___      1 ATGCGGTCAACATTAAGAAAAGACCTTATTGAATTATTTTCTCAGGCAGG     50
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU22440___bi      1 ATGCGGTCAACATTAAGAAAAGACCTTATTGAATTATTTTCTCAGGCCGG     50

BSNT_03343___     51 CAATGAATTTATTTCCGGCCAAAAAATCAGTGATGCTCTCGGCTGTTCAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22440___bi     51 CAATGAATTTATTTCCGGCCAAAAAATCAGTGATGCTCTCGGCTGTTCAA    100

BSNT_03343___    101 GAACTGCTGTGTGGAAGCATATTGAAGAGCTTCGGAAAGAGGGTTATGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22440___bi    101 GAACTGCTGTGTGGAAGCATATTGAAGAGCTTCGGAAAGAGGGTTATGAA    150

BSNT_03343___    151 GTAGAAGCCGTTAGAAGAAAAGGATATCGGCTCATCAAAAAACCCGGAAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22440___bi    151 GTAGAAGCCGTTAGAAGAAAAGGATATCGGCTCATCAAAAAACCCGGAAA    200

BSNT_03343___    201 ACTCAGTGAAAGCGAAATTCGTTTTGGATTAAAAACGGAAGTGATGGGCC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22440___bi    201 ACTCAGTGAAAGCGAAATTCGTTTTGGATTAAAAACGGAAGTGATGGGCC    250

BSNT_03343___    251 AGCATCTTATTTACCATGACGTTCTTTCAAGCACGCAAAAAACGGCTCAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22440___bi    251 AGCATCTTATTTACCATGACGTTCTTTCAAGCACGCAAAAAACGGCTCAT    300

BSNT_03343___    301 GAGCTCGCGAATAATAACTCACCGGAAGGCACCCTCGTGGTGGCTGACAA    350
                     ||||||||||||||||||.||||||||||||||||.||||||||||||||
BSU22440___bi    301 GAGCTCGCGAATAATAACGCACCGGAAGGCACCCTTGTGGTGGCTGACAA    350

BSNT_03343___    351 ACAAACAGCCGGAAGGGGCCGAATGTCTAGGGTATGGCATTCTCAAGAAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22440___bi    351 ACAAACAGCCGGAAGGGGCCGAATGTCTAGGGTATGGCATTCTCAAGAAG    400

BSNT_03343___    401 GAAACGGCGTTTGGATGAGCCTGATTTTGCGGCCTGACATTCCGCTCCAA    450
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU22440___bi    401 GAAACGGTGTTTGGATGAGCCTGATTTTGCGGCCTGACATTCCGCTCCAA    450

BSNT_03343___    451 AAAACACCGCAGCTGACTCTGCTTGCTGCAGTAGCTGTTGTGCAGGGAAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22440___bi    451 AAAACACCGCAGCTGACTCTGCTTGCTGCAGTAGCTGTTGTGCAGGGAAT    500

BSNT_03343___    501 AGAAGAGGCAGCAGGCATCCAAACGGATATTAAATGGCCAAATGATATTT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22440___bi    501 AGAAGAGGCAGCAGGCATCCAAACGGATATTAAATGGCCAAATGATATTT    550

BSNT_03343___    551 TGATTAACGGAAAAAAAACAGTCGGCATCCTAACGGAAATGCAGGCTGAA    600
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU22440___bi    551 TGATTAACGGAAAAAAAACAGTCGGTATCCTAACGGAAATGCAGGCTGAA    600

BSNT_03343___    601 GAAGACCGCGTACGTTCAGTGATCATTGGGATCGGCATTAACGTTAACCA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22440___bi    601 GAAGACCGCGTACGTTCAGTGATCATTGGGATCGGCATTAACGTTAACCA    650

BSNT_03343___    651 GCAGCCTAATGATTTTCCAGATGAATTGAAGGACATCGCGACAAGCCTCA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22440___bi    651 GCAGCCTAATGATTTTCCAGATGAATTGAAGGACATCGCGACAAGCCTCA    700

BSNT_03343___    701 GCCAAGCTGCTGGGGAAAAAATTGATCGGGCCGGCGTCATCCAGCATATT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22440___bi    701 GCCAAGCTGCTGGGGAAAAAATTGATCGGGCCGGCGTCATCCAGCATATT    750

BSNT_03343___    751 TTACTATGCTTTGAGAAACGGTACCGGGATTATATGACGCACGGATTTAC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22440___bi    751 TTACTATGCTTTGAGAAACGGTACCGGGATTATATGACGCACGGATTTAC    800

BSNT_03343___    801 GCCGATTAAGCTTTTATGGGAAAGCTATGCGCTCGGTATTGGCACTAATA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22440___bi    801 GCCGATTAAGCTTTTATGGGAAAGCTATGCGCTCGGTATTGGCACTAATA    850

BSNT_03343___    851 TGAGAGCCAGAACGTTAAACGGAACCTTTTACGGGAAGGCGTTAGGTATA    900
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU22440___bi    851 TGAGAGCCAGAACGTTAAACGGAACCTTTTACGGTAAGGCGTTAGGTATA    900

BSNT_03343___    901 GATGATGAAGGCGTTCTGCTTTTAGAAACGAACGAAGGCATTAAAAAAAT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22440___bi    901 GATGATGAAGGCGTTCTGCTTTTAGAAACGAACGAAGGCATTAAAAAAAT    950

BSNT_03343___    951 CTATTCTGCCGATATCGAATTGGGCTAA    978
                     ||||||||||||||||||||||||||||
BSU22440___bi    951 CTATTCTGCCGATATCGAATTGGGCTAA    978


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03343 and BSU22440

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
