Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_03341 and BSU22430

See Amino acid alignment / Visit BSNT_03341 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:01
# Commandline: needle
#    -asequence dna-align/BSNT_03341___panB.1.22522.seq
#    -bsequence dna-align/BSU22430___panB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03341___panB-BSU22430___panB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03341___panB-BSU22430___panB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03341___panB
# 2: BSU22430___panB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 834
# Identity:     823/834 (98.7%)
# Similarity:   823/834 (98.7%)
# Gaps:           0/834 ( 0.0%)
# Score: 4071.0
# 
#
#=======================================

BSNT_03341___      1 ATGAAAACAAAACTGGATTTTCTAAAAATGAAGGAGTCTGAAGAACCGAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22430___pa      1 ATGAAAACAAAACTGGATTTTCTAAAAATGAAGGAGTCTGAAGAACCGAT     50

BSNT_03341___     51 TGTCATGCTGACCGCTTATGATTATCCGGCAGCTAAACTTGCTGAACAAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22430___pa     51 TGTCATGCTGACCGCTTATGATTATCCGGCAGCTAAACTTGCTGAACAAG    100

BSNT_03341___    101 CGGGAGTTGACATGATTTTAGTCGGTGATTCACTCGGAATGGTCGTCCTC    150
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU22430___pa    101 CGGGAGTTGACATGATTTTAGTCGGTGATTCACTTGGAATGGTCGTCCTC    150

BSNT_03341___    151 GGCCTTGATTCAACTGTGGGTGTGACAGTTGCGGATATGATTCATCATAC    200
                     |||||||||||||||||.|||||||||||||||||.|||||.||||||||
BSU22430___pa    151 GGCCTTGATTCAACTGTCGGTGTGACAGTTGCGGACATGATCCATCATAC    200

BSNT_03341___    201 AAAAGCCGTTAAAAGGGGTGCGCCGAATACCTTTATTGTGACAGATATGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22430___pa    201 AAAAGCCGTTAAAAGGGGTGCGCCGAATACCTTTATTGTGACAGATATGC    250

BSNT_03341___    251 CGTTTATGTCTTATCACCTGTCCAAGGAAGATACGCTGAAAAATGCAGCG    300
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU22430___pa    251 CGTTTATGTCTTATCACCTGTCTAAGGAAGATACGCTGAAAAATGCAGCG    300

BSNT_03341___    301 GCTATCGTTCAGGAAAGCGGAGCTGACGCACTGAAGCTTGAGGGCGGAGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22430___pa    301 GCTATCGTTCAGGAAAGCGGAGCTGACGCACTGAAGCTTGAGGGCGGAGA    350

BSNT_03341___    351 AGGCGTGTTTGAATCCATTCGCGCATTGACGCTTGGAGGCATTCCAGTAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22430___pa    351 AGGCGTGTTTGAATCCATTCGCGCATTGACGCTTGGAGGCATTCCAGTAG    400

BSNT_03341___    401 TCAGTCACTTAGGTTTGACACCGCAGTCAGTCGGCGTACTGGGCGGCTAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22430___pa    401 TCAGTCACTTAGGTTTGACACCGCAGTCAGTCGGCGTACTGGGCGGCTAT    450

BSNT_03341___    451 AAAGTACAGGGCAAAGACGAACAAAGCGCCAAAAAATTAATAGAAGACAG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22430___pa    451 AAAGTACAGGGCAAAGACGAACAAAGCGCCAAAAAATTAATAGAAGACAG    500

BSNT_03341___    501 TATAAAATGCGAAGAAGCAGGAGCTATGATGCTTGTGCTGGAATGTGTAC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU22430___pa    501 TATAAAATGCGAAGAAGCAGGAGCTATGATGCTTGTGCTGGAATGTGTGC    550

BSNT_03341___    551 CGGCAGAACTCACAGCCAAAATTGCCGATACGCTAAGCATACCGGTCATT    600
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU22430___pa    551 CGGCAGAACTCACAGCCAAAATTGCCGAGACGCTAAGCATACCGGTCATT    600

BSNT_03341___    601 GGAATCGGGGCGGGTGTGAAAGCAGACGGACAAGTTCTCGTTTATCATGA    650
                     |||||||||||.|||||||||||.||||||||||||||||||||||||||
BSU22430___pa    601 GGAATCGGGGCTGGTGTGAAAGCGGACGGACAAGTTCTCGTTTATCATGA    650

BSNT_03341___    651 TATTATCGGCCACGGTGTTGAGAGAACACCTAAATTTGTAAAGCAATATA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22430___pa    651 TATTATCGGCCACGGTGTTGAGAGAACACCTAAATTTGTAAAGCAATATA    700

BSNT_03341___    701 CGCGTATTGATGAAACCATCGAAACAGCAATCAGCGGATATGTTCAGGAT    750
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU22430___pa    701 CGCGCATTGATGAAACCATCGAAACAGCAATCAGCGGATATGTTCAGGAT    750

BSNT_03341___    751 GTAAGACATCGTGCTTTCCCTGAACAAAAGCATTCCTTTCAAATGAACCA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22430___pa    751 GTAAGACATCGTGCTTTCCCTGAACAAAAGCATTCCTTTCAAATGAACCA    800

BSNT_03341___    801 GACAGTGCTGGACGGCTTGTACGGGGGAAAATAA    834
                     |||||||||.||||||||||||||||||||||||
BSU22430___pa    801 GACAGTGCTTGACGGCTTGTACGGGGGAAAATAA    834


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.