Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_03323 and BSU22310

See Amino acid alignment / Visit BSNT_03323 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:57
# Commandline: needle
#    -asequence dna-align/BSNT_03323___recU.1.22522.seq
#    -bsequence dna-align/BSU22310___recU.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03323___recU-BSU22310___recU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03323___recU-BSU22310___recU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03323___recU
# 2: BSU22310___recU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 621
# Identity:     618/621 (99.5%)
# Similarity:   618/621 (99.5%)
# Gaps:           0/621 ( 0.0%)
# Score: 3078.0
# 
#
#=======================================

BSNT_03323___      1 GTGATTCGGTATCCTAACGGAAAAACATTTCAGCCGAAACATTCGGTTTC     50
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU22310___re      1 GTGATTCGGTATCCTAATGGAAAAACATTTCAGCCGAAACATTCGGTTTC     50

BSNT_03323___     51 ATCCCAAAACAGTCAGAAAAGGGCCCCGTCTTACAGTAATCGCGGAATGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22310___re     51 ATCCCAAAACAGTCAGAAAAGGGCCCCGTCTTACAGTAATCGCGGAATGA    100

BSNT_03323___    101 CCCTCGAAGATGACTTAAACGAAACGAATAAGTATTATCTGACAAACCAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22310___re    101 CCCTCGAAGATGACTTAAACGAAACGAATAAGTATTATCTGACAAACCAA    150

BSNT_03323___    151 ATTGCCGTTATACACAAAAAGCCGACACCTGTTCAAATTGTAAATGTCCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22310___re    151 ATTGCCGTTATACACAAAAAGCCGACACCTGTTCAAATTGTAAATGTCCA    200

BSNT_03323___    201 TTATCCAAAAAGAAGTGCCGCAGTGATTAAAGAAGCTTACTTTAAACAAT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22310___re    201 TTATCCAAAAAGAAGTGCCGCAGTGATTAAAGAAGCTTACTTTAAACAAT    250

BSNT_03323___    251 CATCGACAACAGACTACAATGGGATTTACAAAGGGCGGTATATTGATTTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22310___re    251 CATCGACAACAGACTACAATGGGATTTACAAAGGGCGGTATATTGATTTT    300

BSNT_03323___    301 GAGGCGAAAGAAACGAAAAACAAGACCTCTTTCCCCCTGCAGAATTTTCA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22310___re    301 GAGGCGAAAGAAACGAAAAACAAGACCTCTTTCCCCCTGCAGAATTTTCA    350

BSNT_03323___    351 TGACCATCAAATCGAGCATATGAAGCAGGTAAAGGCTCAAGACGGTATTT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22310___re    351 TGACCATCAAATCGAGCATATGAAGCAGGTAAAGGCTCAAGACGGTATTT    400

BSNT_03323___    401 GTTTTGTTATTATATCCGCTTTCGACCAGGTATATTTTTTGGAAGCCGAT    450
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU22310___re    401 GTTTTGTTATTATATCCGCTTTCGACCAGGTTTATTTTTTGGAAGCCGAT    450

BSNT_03323___    451 AAGCTGTTTTATTTCTGGGACAGAAAAGAAAAAAACGGCAGAAAATCAAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22310___re    451 AAGCTGTTTTATTTCTGGGACAGAAAAGAAAAAAACGGCAGAAAATCAAT    500

BSNT_03323___    501 TCGAAAAGATGAGTTGGAAGAAACAGCTTATCCGATTTTTCTTGGATACG    550
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU22310___re    501 TCGAAAAGATGAGTTGGAAGAAACAGCTTATCCGATTTCTCTTGGATACG    550

BSNT_03323___    551 CACCCAGAATTGATTATATTAGTATTATTGAACAGCTTTATTTTTCGCCA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22310___re    551 CACCCAGAATTGATTATATTAGTATTATTGAACAGCTTTATTTTTCGCCA    600

BSNT_03323___    601 TCATCTGGTGCGAAAGGTTGA    621
                     |||||||||||||||||||||
BSU22310___re    601 TCATCTGGTGCGAAAGGTTGA    621


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.