Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_03316 and BSU22260

See Amino acid alignment / Visit BSNT_03316 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:57
# Commandline: needle
#    -asequence dna-align/BSNT_03316___yppF.1.22522.seq
#    -bsequence dna-align/BSU22260___yppF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03316___yppF-BSU22260___yppF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03316___yppF-BSU22260___yppF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03316___yppF
# 2: BSU22260___yppF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 189
# Identity:     189/189 (100.0%)
# Similarity:   189/189 (100.0%)
# Gaps:           0/189 ( 0.0%)
# Score: 945.0
# 
#
#=======================================

BSNT_03316___      1 ATGAACGTATCATACTTAAGCAAACGTTTTGCAGAAATGAAGAAATATGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22260___yp      1 ATGAACGTATCATACTTAAGCAAACGTTTTGCAGAAATGAAGAAATATGA     50

BSNT_03316___     51 AACAGACTGTATGAATAAACTGATGGACTTTGCCAAGTTCCTCTATATTC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22260___yp     51 AACAGACTGTATGAATAAACTGATGGACTTTGCCAAGTTCCTCTATATTC    100

BSNT_03316___    101 AAGGACATCTCAGCATAACTGAGTTTCGTAACAGTATGAAGGTTCTCGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22260___yp    101 AAGGACATCTCAGCATAACTGAGTTTCGTAACAGTATGAAGGTTCTCGAA    150

BSNT_03316___    151 GCAAATGGAGCAGAAAGCCCGGCATATGAGATGAATTAA    189
                     |||||||||||||||||||||||||||||||||||||||
BSU22260___yp    151 GCAAATGGAGCAGAAAGCCCGGCATATGAGATGAATTAA    189


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.