Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03298 and BSU22140

See Amino acid alignment / Visit BSNT_03298 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:55
# Commandline: needle
#    -asequence dna-align/BSNT_03298___kduD.1.22522.seq
#    -bsequence dna-align/BSU22140___kduD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03298___kduD-BSU22140___kduD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03298___kduD-BSU22140___kduD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03298___kduD
# 2: BSU22140___kduD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 765
# Identity:     753/765 (98.4%)
# Similarity:   753/765 (98.4%)
# Gaps:           0/765 ( 0.0%)
# Score: 3717.0
# 
#
#=======================================

BSNT_03298___      1 ATGGGTTATCTACATGACGTCTTTTCATTAGAAGGAAAAACAGCGCTGGT     50
                     |||||||||||||||||||.||||||||||.|||||||||||||||||||
BSU22140___kd      1 ATGGGTTATCTACATGACGCCTTTTCATTAAAAGGAAAAACAGCGCTGGT     50

BSNT_03298___     51 GACAGGCCCGGGAACAGGGATCGGTCAAGGTATTGCCAAAGCCCTAGCCG    100
                     ||||||||||||||||||||||||||||||.||.||||||||||||||||
BSU22140___kd     51 GACAGGCCCGGGAACAGGGATCGGTCAAGGAATAGCCAAAGCCCTAGCCG    100

BSNT_03298___    101 GAGCTGGCGCTGATATTATCGGCACATCACATACAAGCAGTCTGTCTGAA    150
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU22140___kd    101 GGGCTGGCGCTGATATTATCGGCACATCACATACAAGCAGTCTGTCTGAA    150

BSNT_03298___    151 ACACAGCAGCTTGTGGAAAAGGAAGGCCGGATATTTACATCTTTTACATT    200
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU22140___kd    151 ACACAGCAGCTTGTGGAACAGGAAGGCCGGATATTTACATCTTTTACATT    200

BSNT_03298___    201 GGACATGAGCAAGCCGGAAGCGATAAAGGATTCTGCAGCTGACCTGTTTG    250
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU22140___kd    201 GGACATGAGCAAGCCGGAAGCGATAAAGGATTCTGCAGCTGAGCTGTTTG    250

BSNT_03298___    251 AAAACAGGCAGATCGACATCCTTGTCAATAATGCCGGCATTATTCATCGG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22140___kd    251 AAAACAGGCAGATCGACATCCTTGTCAATAATGCCGGCATTATTCATCGG    300

BSNT_03298___    301 GAAAAAGCGGAAGATTTTTCAGAAGAGAACTGGCAGCACGTACTGAATGT    350
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU22140___kd    301 GAAAAAGCGGAAGATTTTCCAGAAGAGAACTGGCAGCACGTACTGAATGT    350

BSNT_03298___    351 CAATCTACACAGCCTGTTTATTCTGACACAGCTTGCTGGCAGGCACATGC    400
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU22140___kd    351 CAATCTAAACAGCCTGTTTATTCTGACACAGCTTGCTGGCAGGCACATGC    400

BSNT_03298___    401 TGAAAAGAGGTCACGGAAAGATTATTAATATTGCCTCTCTCCTGTCTTTT    450
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU22140___kd    401 TGAAAAGAGGTCATGGAAAGATTATTAATATTGCCTCTCTCCTGTCTTTT    450

BSNT_03298___    451 CAAGGCGGCATCCTCGTTCCGGCTTACACCGCGAGCAAACACGCTGTTGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22140___kd    451 CAAGGCGGCATCCTCGTTCCGGCTTACACCGCGAGCAAACACGCTGTTGC    500

BSNT_03298___    501 CGGTTTGACAAAATCATTTGCAAATGAGTGGGCAGCGTCAGGTATTCAGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22140___kd    501 CGGTTTGACAAAATCATTTGCAAATGAGTGGGCAGCGTCAGGTATTCAGG    550

BSNT_03298___    551 TCAACGCAATCGCCCCAGGCTATATTTCTACTGCCAATACAAAGCCTATT    600
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU22140___kd    551 TCAACGCAATCGCCCCAGGCTATATTTCTACTGCGAATACAAAGCCTATT    600

BSNT_03298___    601 CGGGATGACGAAAAGCGAAATGAGGACATTTTAAAGAGAATTCCTGCCGG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22140___kd    601 CGGGATGACGAAAAGCGAAATGAGGACATTTTAAAGAGAATTCCTGCCGG    650

BSNT_03298___    651 CCGCTGGGGCCACGCGGATGATATCGGGGGGACTGCAGTCTTTTTGGCAT    700
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU22140___kd    651 CCGCTGGGGCCAAGCGGATGATATCGGGGGGACTGCAGTCTTTTTGGCAT    700

BSNT_03298___    701 CACGTGCTTCAGATTATGTAAATGGACATATTTTAGCAGTTGATGGCGGC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22140___kd    701 CACGTGCTTCAGATTATGTAAATGGACATATTTTAGCAGTTGATGGCGGC    750

BSNT_03298___    751 TGGCTATCCCGCTGA    765
                     |||||||||||||||
BSU22140___kd    751 TGGCTATCCCGCTGA    765


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