Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03293 and BSU22100

See Amino acid alignment / Visit BSNT_03293 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:54
# Commandline: needle
#    -asequence dna-align/BSNT_03293___kdgA.1.22522.seq
#    -bsequence dna-align/BSU22100___kdgA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03293___kdgA-BSU22100___kdgA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03293___kdgA-BSU22100___kdgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03293___kdgA
# 2: BSU22100___kdgA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 591
# Identity:     578/591 (97.8%)
# Similarity:   578/591 (97.8%)
# Gaps:           0/591 ( 0.0%)
# Score: 2838.0
# 
#
#=======================================

BSNT_03293___      1 ATGGAGTCCAAAGTTGTTGAAAACCGTCTGAAAGAAGCAAAGCTGATTGC     50
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU22100___kd      1 ATGGAGTCCAAAGTCGTTGAAAACCGTCTGAAAGAAGCAAAGCTGATTGC     50

BSNT_03293___     51 AGTCATTCGTTCAAAGGATACACAGGAGGCCTGTCAGCAGATTGAGAGTT    100
                     ||||||||||||||||||||..||||||||||||||||||||||||||||
BSU22100___kd     51 AGTCATTCGTTCAAAGGATAAGCAGGAGGCCTGTCAGCAGATTGAGAGTT    100

BSNT_03293___    101 TGTTAGATAAAGGGATTCGTGCAGTTGAAGTGACGTATACAACCCCCGGG    150
                     |.||||||||||||||||||||||||||||||||||||||.|||||||||
BSU22100___kd    101 TATTAGATAAAGGGATTCGTGCAGTTGAAGTGACGTATACGACCCCCGGG    150

BSNT_03293___    151 GCATCAGATATTATCGAATCCTTCCGTAATAGGGAAGATATTTTAATTGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22100___kd    151 GCATCAGATATTATCGAATCCTTCCGTAATAGGGAAGATATTTTAATTGG    200

BSNT_03293___    201 CGCGGGCACTGTCATCACCGCGCAGCAAGCTGGGGAAGCTGCTGAGGCTG    250
                     ||||||.||.|||||||.|||||||||||||||||||||||||.||||||
BSU22100___kd    201 CGCGGGTACGGTCATCAGCGCGCAGCAAGCTGGGGAAGCTGCTAAGGCTG    250

BSNT_03293___    251 GCGCGCAGTTTATTGTCAGTCCGGGTTTTTCAGCTGATCTTGCTGAACAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22100___kd    251 GCGCGCAGTTTATTGTCAGTCCGGGTTTTTCAGCTGATCTTGCTGAACAT    300

BSNT_03293___    301 CTATCTTTTGTAAAGACACATTATATCCCCGGCGTCTTGACTCCGAGCGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22100___kd    301 CTATCTTTTGTAAAGACACATTATATCCCCGGCGTCTTGACTCCGAGCGA    350

BSNT_03293___    351 AATTATGGAAGCGCTGACATTCGGTTTTACGACATTAAAGCTGTTCCCAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22100___kd    351 AATTATGGAAGCGCTGACATTCGGTTTTACGACATTAAAGCTGTTCCCAA    400

BSNT_03293___    401 GCGGTGTGTTTGGCATCCCGTTTATGAAAAATTTAGCGGGTCCTTTCCCG    450
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU22100___kd    401 GCGGTGTGTTTGGCATTCCGTTTATGAAAAATTTAGCGGGTCCTTTCCCG    450

BSNT_03293___    451 CAGGTGACCTTTATTCCGACAGGCGGGATACATCCGTCTGAAGTGCCGGA    500
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU22100___kd    451 CAGGTGACCTTTATTCCGACAGGCGGGATACATCCGTCTGAAGTGCCTGA    500

BSNT_03293___    501 TTGGCTTAGAGCCGGAGCTGGCGCCGTTGGAGTCGGCAGCCAGCTGGGCA    550
                     |||||||||||||||||||||||||||.|||||||||||||||.||||||
BSU22100___kd    501 TTGGCTTAGAGCCGGAGCTGGCGCCGTCGGAGTCGGCAGCCAGTTGGGCA    550

BSNT_03293___    551 GCTGTTCAAAAGAGGATTTGCAGGCTGTTTTCCAAGTGTAA    591
                     |||||||||||||||||||||||||||||||||||||||||
BSU22100___kd    551 GCTGTTCAAAAGAGGATTTGCAGGCTGTTTTCCAAGTGTAA    591


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