Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03263 and BSU21880
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:49
# Commandline: needle
# -asequence dna-align/BSNT_03263___ypgR.1.22522.seq
# -bsequence dna-align/BSU21880___ypgR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03263___ypgR-BSU21880___ypgR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03263___ypgR-BSU21880___ypgR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03263___ypgR
# 2: BSU21880___ypgR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1134
# Identity: 1121/1134 (98.9%)
# Similarity: 1121/1134 (98.9%)
# Gaps: 0/1134 ( 0.0%)
# Score: 5553.0
#
#
#=======================================
BSNT_03263___ 1 ATGAAGATAAAATCAATTGAACCTACACCAAGCCCGAATACAATGAAAGT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp 1 ATGAAGATAAAATCAATTGAACCTACACCAAGCCCGAATACAATGAAAGT 50
BSNT_03263___ 51 CATCTTAACGGAAGAGCTTCCGGCGGGCAAAAGCAATAACTATAAACCTG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp 51 CATCTTAACGGAAGAGCTTCCGGCGGGCAAAAGCAATAACTATAAACCTG 100
BSNT_03263___ 101 AGCAAGCAGAAGGCGCACCGCCTGTTATAGAGGAAATTCTTAAAATAGAT 150
|||||||||||||||||||||.||||||||.||||||.||||||||||||
BSU21880___yp 101 AGCAAGCAGAAGGCGCACCGCTTGTTATAGCGGAAATCCTTAAAATAGAT 150
BSNT_03263___ 151 GGAGTTAAAGGGGTATATCACGTCGCAGATTTTCTTGCTGTTGAACGGAA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp 151 GGAGTTAAAGGGGTATATCACGTCGCAGATTTTCTTGCTGTTGAACGGAA 200
BSNT_03263___ 201 TGCAAGATACGACTGGAAAGACATATTACCGCAAGTCCGCACTGCATTTG 250
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU21880___yp 201 TGCAAGATACGACTGGAAAGACATTTTACCGCAAGTCCGCACTGCATTTG 250
BSNT_03263___ 251 GGATGGAAAGTGCTGAAAGCGGAGAAGAAAATCGTTCTGATCAAGAATCT 300
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU21880___yp 251 GGATGGAAAGTGCTGAAAGCGCAGAAGAAAATCGTTCTGATCAAGAATCT 300
BSNT_03263___ 301 TTTGGAGAGGTAAAAGTTTTTGTGCAGATGTTCAGCGGCATTCCTATGCA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp 301 TTTGGAGAGGTAAAAGTTTTTGTGCAGATGTTCAGCGGCATTCCTATGCA 350
BSNT_03263___ 351 AGTTAAATTAACCGATGGAGAGCGGGAAGAACGCTTCGGCTTACCTGAAC 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp 351 AGTTAAATTAACCGATGGAGAGCGGGAAGAACGCTTCGGCTTACCTGAAC 400
BSNT_03263___ 401 GCTTTCAGCAGGCGATCTTAAAACTTAGATCTGAAGCTTCCAATGTTGTG 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp 401 GCTTTCAGCAGGCGATCTTAAAACTTAGATCTGAAGCTTCCAATGTTGTG 450
BSNT_03263___ 451 TTTGAGCGGGCTTGGAAAGAACAAGGTGTCAGATTCGGTGACTTTGATGA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp 451 TTTGAGCGGGCTTGGAAAGAACAAGGTGTCAGATTCGGTGACTTTGATGA 500
BSNT_03263___ 501 AATCGGCCATGACGTGACAGAAGAGCTTCAGGCGGCATACAGTGATGAAC 550
||||||||||||.|||||||||||||||||.|||||||||||||||||||
BSU21880___yp 501 AATCGGCCATGATGTGACAGAAGAGCTTCAAGCGGCATACAGTGATGAAC 550
BSNT_03263___ 551 GGCTGAAACGACTGACTGAAGCAGCCGCTCAAGGAAAGGGCGAAGCAAAA 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp 551 GGCTGAAACGACTGACTGAAGCAGCCGCTCAAGGAAAGGGCGAAGCAAAA 600
BSNT_03263___ 601 CAAACTGTACAGCGCAAAGCGTATAAAGTAACGCTTGACATGCTGGATGA 650
|||.||||||||||||||||||||||||||||||||||.|||||||||||
BSU21880___yp 601 CAAGCTGTACAGCGCAAAGCGTATAAAGTAACGCTTGATATGCTGGATGA 650
BSNT_03263___ 651 TGAGGACTGGAAAAAGCGTTATGCACACTTGGAACAGATGGATCCGAAAG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp 651 TGAGGACTGGAAAAAGCGTTATGCACACTTGGAACAGATGGATCCGAAAG 700
BSNT_03263___ 701 AAGAGGATATCCCGGTTTTACAGAAGGCATTGGATGATCCAAAGGTGTCC 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp 701 AAGAGGATATCCCGGTTTTACAGAAGGCATTGGATGATCCAAAGGTGTCC 750
BSNT_03263___ 751 ATCAGAAGACAGGCTGTTGTGTACTTAGGGATGATTGAAACACCTGATGT 800
|||||||||||||||||||||||||||||.||||||||||||||||||||
BSU21880___yp 751 ATCAGAAGACAGGCTGTTGTGTACTTAGGAATGATTGAAACACCTGATGT 800
BSNT_03263___ 801 TCTTCCTCTATTGTATAAAGCACTTGAGGACAAAGCTGTATCAGTCAGAA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp 801 TCTTCCTCTATTGTATAAAGCACTTGAGGACAAAGCTGTATCAGTCAGAA 850
BSNT_03263___ 851 GAACGGCCGGAGACTGCCTGTCTGATATCGGCGATCCTCAAGCCATTCCC 900
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU21880___yp 851 GAACGGCCGGAGACTGCCTGTCTGATATCGGCGATCCTCAAGCCATTCCT 900
BSNT_03263___ 901 GCTATGATCAAGTCGTTAAGCGACTCCAGCAAGCTTGTTCGCTGGCGTGC 950
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU21880___yp 901 GCTATGATCAAGTCATTAAGCGACTCCAGCAAGCTTGTTCGCTGGCGTGC 950
BSNT_03263___ 951 GGCCATGTTCCTGTACGAAGTCGGCGATGAAAGTGCAATTGAAGCTTTGC 1000
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp 951 CGCCATGTTCCTGTACGAAGTCGGCGATGAAAGTGCAATTGAAGCTTTGC 1000
BSNT_03263___ 1001 GCGCTGCCGAAGATGACCCCGAATTTGAGGTCAGCCTTCAAGTCAAAATG 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp 1001 GCGCTGCCGAAGATGACCCCGAATTTGAGGTCAGCCTTCAAGTCAAAATG 1050
BSNT_03263___ 1051 GCGCTTGAACGTATTGAGCATGGAGAAGAAGCAAAAGGTTCTGTTTGGAA 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp 1051 GCGCTTGAACGTATTGAGCATGGAGAAGAAGCAAAAGGTTCTGTTTGGAA 1100
BSNT_03263___ 1101 ACAAATGACGGAAAGCAGAAAAAAAGGCGAATAA 1134
||||||||||||||||||||||||||||||||||
BSU21880___yp 1101 ACAAATGACGGAAAGCAGAAAAAAAGGCGAATAA 1134
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